Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXR1Q6PIV2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 LINC01521-201ENST00000504184 1943 ntBASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 AC142381.2-201ENST00000566120 298 ntBASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
FOXR1Q6PIV2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
FOXR1Q6PIV2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FOXR1Q6PIV2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
FOXR1Q6PIV2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FOXR1Q6PIV2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FOXR1Q6PIV2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FOXR1Q6PIV2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
FOXR1Q6PIV2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FOXR1Q6PIV2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 AC133561.4-201ENST00000566112 224 ntBASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXR1Q6PIV2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 UNC93B3-201ENST00000308076 687 ntBASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 ZNRF2P3-201ENST00000424200 374 ntBASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
FOXR1Q6PIV2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 SNX5-217ENST00000606557 1087 ntBASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 AC106739.1-201ENST00000617035 715 ntBASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR1Q6PIV2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FOXR1Q6PIV2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR1Q6PIV2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 AL136162.1-201ENST00000607711 1078 ntBASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 AC090877.2-201ENST00000558441 1738 ntBASIC22.31■■□□□ 1.16
FOXR1Q6PIV2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR1Q6PIV2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms