Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DEPDC1Q5TB30 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DEPDC1Q5TB30 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.86■□□□□ 0.93
DEPDC1Q5TB30 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DEPDC1Q5TB30 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DEPDC1Q5TB30 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.86■□□□□ 0.93
DEPDC1Q5TB30 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.86■□□□□ 0.93
DEPDC1Q5TB30 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 AC010525.1-201ENST00000585559 441 ntBASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 AC068587.7-201ENST00000641602 218 ntBASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 LINC00526-201ENST00000581067 1875 ntBASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 EP400NL-214ENST00000641289 2402 ntBASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DEPDC1Q5TB30 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 AC139530.1-201ENST00000575312 1977 ntBASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DEPDC1Q5TB30 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DEPDC1Q5TB30 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DEPDC1Q5TB30 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DEPDC1Q5TB30 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DEPDC1Q5TB30 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
DEPDC1Q5TB30 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DEPDC1Q5TB30 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 AL136162.1-201ENST00000607711 1078 ntBASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DEPDC1Q5TB30 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 AC024257.2-201ENST00000549699 147 ntBASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 LINC00565-201ENST00000562710 2331 ntBASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DEPDC1Q5TB30 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.8■□□□□ 0.92
DEPDC1Q5TB30 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms