Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 AC103834.1-201ENST00000520383 144 ntBASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 AC103724.3-201ENST00000564481 992 ntBASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00242Q5T6M2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00242Q5T6M2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 AC009102.2-201ENST00000606772 1639 ntBASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00242Q5T6M2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 YBX1P4-201ENST00000392794 808 ntBASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 AC021242.3-201ENST00000607598 1377 ntBASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
LINC00242Q5T6M2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC00242Q5T6M2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms