Protein–RNA interactions for Protein: Q2QD12

RPEL1, Ribulose-phosphate 3-epimerase-like protein 1, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPEL1Q2QD12 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.16■□□□□ 0.34
RPEL1Q2QD12 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.16■□□□□ 0.34
RPEL1Q2QD12 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPEL1Q2QD12 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPEL1Q2QD12 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPEL1Q2QD12 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPEL1Q2QD12 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPEL1Q2QD12 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RPEL1Q2QD12 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 AL121603.2-201ENST00000557373 2117 ntBASIC17.15■□□□□ 0.34
RPEL1Q2QD12 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.15■□□□□ 0.34
RPEL1Q2QD12 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 AL353803.4-201ENST00000565882 1934 ntBASIC17.14■□□□□ 0.33
RPEL1Q2QD12 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 DUX4L4-201ENST00000566884 1269 ntBASIC17.14■□□□□ 0.33
RPEL1Q2QD12 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPEL1Q2QD12 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.13■□□□□ 0.33
RPEL1Q2QD12 AC096631.2-201ENST00000436136 790 ntBASIC17.13■□□□□ 0.33
RPEL1Q2QD12 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.13■□□□□ 0.33
RPEL1Q2QD12 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPEL1Q2QD12 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 UNC93B3-201ENST00000308076 687 ntBASIC17.12■□□□□ 0.33
RPEL1Q2QD12 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 AC006455.2-201ENST00000429931 906 ntBASIC17.12■□□□□ 0.33
RPEL1Q2QD12 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 pRNA.6-201ENST00000610482 90 ntBASIC17.12■□□□□ 0.33
RPEL1Q2QD12 pRNA.5-201ENST00000612139 90 ntBASIC17.12■□□□□ 0.33
RPEL1Q2QD12 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 pRNA.11-201ENST00000618423 90 ntBASIC17.12■□□□□ 0.33
RPEL1Q2QD12 pRNA.13-201ENST00000619112 90 ntBASIC17.12■□□□□ 0.33
RPEL1Q2QD12 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPEL1Q2QD12 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPEL1Q2QD12 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms