Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDS5AQ29RF7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PDS5AQ29RF7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PDS5AQ29RF7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.11■■□□□ 1.77
PDS5AQ29RF7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.11■■□□□ 1.77
PDS5AQ29RF7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.11■■□□□ 1.77
PDS5AQ29RF7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.11■■□□□ 1.77
PDS5AQ29RF7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDS5AQ29RF7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
PDS5AQ29RF7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PDS5AQ29RF7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PDS5AQ29RF7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.1■■□□□ 1.77
PDS5AQ29RF7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.1■■□□□ 1.77
PDS5AQ29RF7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.1■■□□□ 1.77
PDS5AQ29RF7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.1■■□□□ 1.77
PDS5AQ29RF7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDS5AQ29RF7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 AC016769.1-201ENST00000409132 1010 ntBASIC26.08■■□□□ 1.77
PDS5AQ29RF7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.08■■□□□ 1.77
PDS5AQ29RF7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 KRT18P11-201ENST00000435214 1283 ntBASIC26.07■■□□□ 1.76
PDS5AQ29RF7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 RAP2CP1-201ENST00000605103 478 ntBASIC26.07■■□□□ 1.76
PDS5AQ29RF7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.07■■□□□ 1.76
PDS5AQ29RF7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDS5AQ29RF7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 AC104187.1-201ENST00000607510 612 ntBASIC26.05■■□□□ 1.76
PDS5AQ29RF7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDS5AQ29RF7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDS5AQ29RF7 AP006587.3-201ENST00000525742 1516 ntBASIC26.04■■□□□ 1.76
PDS5AQ29RF7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
PDS5AQ29RF7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.04■■□□□ 1.76
PDS5AQ29RF7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.04■■□□□ 1.76
PDS5AQ29RF7 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.04■■□□□ 1.76
PDS5AQ29RF7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDS5AQ29RF7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDS5AQ29RF7 ESRRAP2-201ENST00000418437 1549 ntBASIC26.03■■□□□ 1.76
PDS5AQ29RF7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
PDS5AQ29RF7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.03■■□□□ 1.76
PDS5AQ29RF7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.03■■□□□ 1.76
PDS5AQ29RF7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDS5AQ29RF7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.03■■□□□ 1.76
PDS5AQ29RF7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.03■■□□□ 1.76
PDS5AQ29RF7 AC080038.1-201ENST00000611274 1154 ntBASIC26.03■■□□□ 1.76
PDS5AQ29RF7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDS5AQ29RF7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms