Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.66■□□□□ 0.9
VSX2P58304 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.66■□□□□ 0.9
VSX2P58304 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 BX005040.4-201ENST00000637145 1518 ntBASIC20.66■□□□□ 0.9
VSX2P58304 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 AC137767.1-201ENST00000602918 1920 ntBASIC20.66■□□□□ 0.9
VSX2P58304 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.66■□□□□ 0.9
VSX2P58304 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VSX2P58304 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VSX2P58304 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.65■□□□□ 0.9
VSX2P58304 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VSX2P58304 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VSX2P58304 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VSX2P58304 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VSX2P58304 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.65■□□□□ 0.9
VSX2P58304 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VSX2P58304 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VSX2P58304 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VSX2P58304 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
VSX2P58304 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.65■□□□□ 0.9
VSX2P58304 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
VSX2P58304 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
VSX2P58304 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VSX2P58304 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
VSX2P58304 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VSX2P58304 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VSX2P58304 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.64■□□□□ 0.9
VSX2P58304 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.64■□□□□ 0.9
VSX2P58304 OR7E47P-201ENST00000546390 1422 ntBASIC20.64■□□□□ 0.89
VSX2P58304 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VSX2P58304 LINC00526-201ENST00000581067 1875 ntBASIC20.64■□□□□ 0.89
VSX2P58304 CLDN5-201ENST00000403084 2357 ntBASIC20.64■□□□□ 0.89
VSX2P58304 ESRRAP2-201ENST00000418437 1549 ntBASIC20.63■□□□□ 0.89
VSX2P58304 LINC02228-203ENST00000641970 1355 ntBASIC20.63■□□□□ 0.89
VSX2P58304 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.63■□□□□ 0.89
VSX2P58304 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSX2P58304 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.63■□□□□ 0.89
VSX2P58304 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSX2P58304 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VSX2P58304 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSX2P58304 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VSX2P58304 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSX2P58304 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VSX2P58304 AC068473.5-201ENST00000616428 2072 ntBASIC20.63■□□□□ 0.89
VSX2P58304 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSX2P58304 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VSX2P58304 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VSX2P58304 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VSX2P58304 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSX2P58304 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VSX2P58304 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSX2P58304 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSX2P58304 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.62■□□□□ 0.89
VSX2P58304 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.62■□□□□ 0.89
VSX2P58304 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VSX2P58304 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.62■□□□□ 0.89
VSX2P58304 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.62■□□□□ 0.89
VSX2P58304 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.62■□□□□ 0.89
VSX2P58304 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.62■□□□□ 0.89
VSX2P58304 AC079834.2-201ENST00000609776 1949 ntBASIC20.62■□□□□ 0.89
VSX2P58304 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.62■□□□□ 0.89
VSX2P58304 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSX2P58304 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSX2P58304 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSX2P58304 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.61■□□□□ 0.89
VSX2P58304 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSX2P58304 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.61■□□□□ 0.89
VSX2P58304 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSX2P58304 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VSX2P58304 CCDC92B-201ENST00000575506 885 ntBASIC20.61■□□□□ 0.89
VSX2P58304 TPRG1LP1-201ENST00000598702 760 ntBASIC20.61■□□□□ 0.89
VSX2P58304 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.61■□□□□ 0.89
VSX2P58304 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VSX2P58304 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSX2P58304 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.61■□□□□ 0.89
VSX2P58304 AC139530.1-201ENST00000575312 1977 ntBASIC20.61■□□□□ 0.89
VSX2P58304 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VSX2P58304 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSX2P58304 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.6■□□□□ 0.89
VSX2P58304 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.6■□□□□ 0.89
VSX2P58304 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.6■□□□□ 0.89
VSX2P58304 AC034268.1-201ENST00000441047 882 ntBASIC20.6■□□□□ 0.89
VSX2P58304 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSX2P58304 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.59■□□□□ 0.89
VSX2P58304 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSX2P58304 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSX2P58304 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
VSX2P58304 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms