Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.75■■□□□ 1.07
NUBP1P53384 AC093787.1-201ENST00000450396 207 ntBASIC21.75■■□□□ 1.07
NUBP1P53384 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
NUBP1P53384 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.75■■□□□ 1.07
NUBP1P53384 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.75■■□□□ 1.07
NUBP1P53384 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NUBP1P53384 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.75■■□□□ 1.07
NUBP1P53384 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.75■■□□□ 1.07
NUBP1P53384 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.75■■□□□ 1.07
NUBP1P53384 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUBP1P53384 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUBP1P53384 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUBP1P53384 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUBP1P53384 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NUBP1P53384 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NUBP1P53384 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUBP1P53384 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.74■■□□□ 1.07
NUBP1P53384 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NUBP1P53384 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUBP1P53384 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.74■■□□□ 1.07
NUBP1P53384 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.74■■□□□ 1.07
NUBP1P53384 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUBP1P53384 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUBP1P53384 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.74■■□□□ 1.07
NUBP1P53384 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NUBP1P53384 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.73■■□□□ 1.07
NUBP1P53384 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUBP1P53384 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUBP1P53384 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUBP1P53384 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
NUBP1P53384 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUBP1P53384 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUBP1P53384 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.72■■□□□ 1.07
NUBP1P53384 AC016405.3-201ENST00000607710 860 ntBASIC21.72■■□□□ 1.07
NUBP1P53384 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUBP1P53384 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NUBP1P53384 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.72■■□□□ 1.07
NUBP1P53384 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.72■■□□□ 1.07
NUBP1P53384 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NUBP1P53384 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUBP1P53384 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUBP1P53384 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUBP1P53384 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NUBP1P53384 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUBP1P53384 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.71■■□□□ 1.07
NUBP1P53384 AC004687.1-201ENST00000579003 1625 ntBASIC21.71■■□□□ 1.07
NUBP1P53384 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NUBP1P53384 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUBP1P53384 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
NUBP1P53384 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NUBP1P53384 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.71■■□□□ 1.07
NUBP1P53384 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.71■■□□□ 1.07
NUBP1P53384 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.71■■□□□ 1.07
NUBP1P53384 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.71■■□□□ 1.07
NUBP1P53384 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.71■■□□□ 1.07
NUBP1P53384 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUBP1P53384 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.71■■□□□ 1.07
NUBP1P53384 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUBP1P53384 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUBP1P53384 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUBP1P53384 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NUBP1P53384 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NUBP1P53384 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUBP1P53384 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NUBP1P53384 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUBP1P53384 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUBP1P53384 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.7■■□□□ 1.06
NUBP1P53384 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.7■■□□□ 1.06
NUBP1P53384 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.7■■□□□ 1.06
NUBP1P53384 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.7■■□□□ 1.06
NUBP1P53384 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.7■■□□□ 1.06
NUBP1P53384 AL162412.1-201ENST00000567129 965 ntBASIC21.7■■□□□ 1.06
NUBP1P53384 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.7■■□□□ 1.06
NUBP1P53384 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.7■■□□□ 1.06
NUBP1P53384 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.7■■□□□ 1.06
NUBP1P53384 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.7■■□□□ 1.06
NUBP1P53384 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.7■■□□□ 1.06
NUBP1P53384 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.7■■□□□ 1.06
NUBP1P53384 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NUBP1P53384 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
NUBP1P53384 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.7■■□□□ 1.06
NUBP1P53384 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.7■■□□□ 1.06
NUBP1P53384 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.69■■□□□ 1.06
NUBP1P53384 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUBP1P53384 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUBP1P53384 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NUBP1P53384 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
NUBP1P53384 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.69■■□□□ 1.06
NUBP1P53384 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.69■■□□□ 1.06
NUBP1P53384 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
NUBP1P53384 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.69■■□□□ 1.06
NUBP1P53384 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUBP1P53384 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUBP1P53384 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.69■■□□□ 1.06
NUBP1P53384 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.69■■□□□ 1.06
NUBP1P53384 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.69■■□□□ 1.06
NUBP1P53384 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms