Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CA15P2-201ENST00000611168 834 ntBASIC21.85■■□□□ 1.09
HADHAP40939 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HADHAP40939 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.85■■□□□ 1.09
HADHAP40939 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.85■■□□□ 1.09
HADHAP40939 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.85■■□□□ 1.09
HADHAP40939 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
HADHAP40939 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.84■■□□□ 1.09
HADHAP40939 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.84■■□□□ 1.09
HADHAP40939 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.84■■□□□ 1.09
HADHAP40939 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.84■■□□□ 1.09
HADHAP40939 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.84■■□□□ 1.09
HADHAP40939 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HADHAP40939 PKD1P6-201ENST00000343738 4769 ntBASIC21.84■■□□□ 1.09
HADHAP40939 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HADHAP40939 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HADHAP40939 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HADHAP40939 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HADHAP40939 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.83■■□□□ 1.09
HADHAP40939 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.83■■□□□ 1.09
HADHAP40939 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.83■■□□□ 1.09
HADHAP40939 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.83■■□□□ 1.09
HADHAP40939 AC106739.1-201ENST00000617035 715 ntBASIC21.83■■□□□ 1.09
HADHAP40939 AC087239.1-201ENST00000622671 572 ntBASIC21.83■■□□□ 1.09
HADHAP40939 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.83■■□□□ 1.09
HADHAP40939 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
HADHAP40939 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HADHAP40939 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.83■■□□□ 1.08
HADHAP40939 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HADHAP40939 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HADHAP40939 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
HADHAP40939 PBX2P1-201ENST00000493219 1291 ntBASIC21.82■■□□□ 1.08
HADHAP40939 AC010525.1-201ENST00000585559 441 ntBASIC21.82■■□□□ 1.08
HADHAP40939 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
HADHAP40939 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HADHAP40939 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HADHAP40939 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HADHAP40939 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HADHAP40939 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
HADHAP40939 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HADHAP40939 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HADHAP40939 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 BX842568.3-201ENST00000418104 571 ntBASIC21.81■■□□□ 1.08
HADHAP40939 SLC47A1P1-202ENST00000449666 945 ntBASIC21.81■■□□□ 1.08
HADHAP40939 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.81■■□□□ 1.08
HADHAP40939 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.81■■□□□ 1.08
HADHAP40939 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HADHAP40939 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
HADHAP40939 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HADHAP40939 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
HADHAP40939 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.8■■□□□ 1.08
HADHAP40939 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HADHAP40939 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HADHAP40939 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HADHAP40939 AC110285.6-201ENST00000617652 491 ntBASIC21.8■■□□□ 1.08
HADHAP40939 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HADHAP40939 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HADHAP40939 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HADHAP40939 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.79■■□□□ 1.08
HADHAP40939 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.79■■□□□ 1.08
HADHAP40939 AP005435.1-201ENST00000529293 1178 ntBASIC21.79■■□□□ 1.08
HADHAP40939 AL139246.5-201ENST00000606645 996 ntBASIC21.79■■□□□ 1.08
HADHAP40939 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HADHAP40939 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.79■■□□□ 1.08
HADHAP40939 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HADHAP40939 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HADHAP40939 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HADHAP40939 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.78■■□□□ 1.08
HADHAP40939 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.78■■□□□ 1.08
HADHAP40939 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HADHAP40939 EDA-201ENST00000338901 1233 ntBASIC21.78■■□□□ 1.08
HADHAP40939 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.78■■□□□ 1.08
HADHAP40939 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HADHAP40939 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HADHAP40939 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms