Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC27.44■■□□□ 1.98
RFC4P35249 KRT18P20-201ENST00000548986 1279 ntBASIC27.44■■□□□ 1.98
RFC4P35249 MIR4758-201ENST00000577688 71 ntBASIC27.44■■□□□ 1.98
RFC4P35249 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.44■■□□□ 1.98
RFC4P35249 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.44■■□□□ 1.98
RFC4P35249 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.44■■□□□ 1.98
RFC4P35249 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.43■■□□□ 1.98
RFC4P35249 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RFC4P35249 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RFC4P35249 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.43■■□□□ 1.98
RFC4P35249 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC27.43■■□□□ 1.98
RFC4P35249 AC010141.2-201ENST00000452426 721 ntBASIC27.43■■□□□ 1.98
RFC4P35249 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RFC4P35249 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RFC4P35249 ITM2C-210ENST00000620962 501 ntBASIC27.43■■□□□ 1.98
RFC4P35249 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
RFC4P35249 DUSP8P5-201ENST00000422884 1815 ntBASIC27.43■■□□□ 1.98
RFC4P35249 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
RFC4P35249 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.43■■□□□ 1.98
RFC4P35249 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RFC4P35249 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RFC4P35249 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.42■■□□□ 1.98
RFC4P35249 AC138907.5-202ENST00000569484 235 ntBASIC27.42■■□□□ 1.98
RFC4P35249 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.42■■□□□ 1.98
RFC4P35249 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RFC4P35249 AL139125.2-201ENST00000623134 1869 ntBASIC27.42■■□□□ 1.98
RFC4P35249 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
RFC4P35249 LINC01124-201ENST00000409786 2117 ntBASIC27.41■■□□□ 1.98
RFC4P35249 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RFC4P35249 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RFC4P35249 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RFC4P35249 KRT18P29-201ENST00000397031 1267 ntBASIC27.41■■□□□ 1.98
RFC4P35249 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.41■■□□□ 1.98
RFC4P35249 RNA5SP413-201ENST00000516373 109 ntBASIC27.41■■□□□ 1.98
RFC4P35249 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
RFC4P35249 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.4■■□□□ 1.98
RFC4P35249 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RFC4P35249 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RFC4P35249 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RFC4P35249 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.4■■□□□ 1.98
RFC4P35249 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.4■■□□□ 1.98
RFC4P35249 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RFC4P35249 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC27.4■■□□□ 1.98
RFC4P35249 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RFC4P35249 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.4■■□□□ 1.98
RFC4P35249 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RFC4P35249 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.4■■□□□ 1.98
RFC4P35249 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RFC4P35249 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.39■■□□□ 1.98
RFC4P35249 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RFC4P35249 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
RFC4P35249 AC013268.1-206ENST00000638368 961 ntBASIC27.39■■□□□ 1.98
RFC4P35249 AC112229.1-201ENST00000639295 961 ntBASIC27.39■■□□□ 1.98
RFC4P35249 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
RFC4P35249 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RFC4P35249 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RFC4P35249 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFC4P35249 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
RFC4P35249 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
RFC4P35249 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFC4P35249 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC27.38■■□□□ 1.97
RFC4P35249 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RFC4P35249 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFC4P35249 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFC4P35249 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.37■■□□□ 1.97
RFC4P35249 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RFC4P35249 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFC4P35249 MIPEPP3-201ENST00000412105 444 ntBASIC27.37■■□□□ 1.97
RFC4P35249 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFC4P35249 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFC4P35249 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFC4P35249 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RFC4P35249 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
RFC4P35249 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RFC4P35249 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.36■■□□□ 1.97
RFC4P35249 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
RFC4P35249 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.36■■□□□ 1.97
RFC4P35249 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RFC4P35249 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.36■■□□□ 1.97
RFC4P35249 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
RFC4P35249 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.36■■□□□ 1.97
RFC4P35249 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RFC4P35249 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RFC4P35249 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFC4P35249 TERF1P5-201ENST00000477545 1207 ntBASIC27.35■■□□□ 1.97
RFC4P35249 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFC4P35249 MKRN4P-201ENST00000444706 1521 ntBASIC27.35■■□□□ 1.97
RFC4P35249 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RFC4P35249 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RFC4P35249 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
RFC4P35249 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
RFC4P35249 AC068338.2-201ENST00000563278 1430 ntBASIC27.34■■□□□ 1.97
RFC4P35249 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC27.34■■□□□ 1.97
RFC4P35249 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC27.34■■□□□ 1.97
RFC4P35249 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.34■■□□□ 1.97
RFC4P35249 PRORSD1P-201ENST00000295112 541 ntBASIC27.34■■□□□ 1.97
RFC4P35249 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.34■■□□□ 1.97
RFC4P35249 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.34■■□□□ 1.97
RFC4P35249 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.34■■□□□ 1.97
RFC4P35249 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms