Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21■□□□□ 0.95
EPHA3P29320 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21■□□□□ 0.95
EPHA3P29320 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21■□□□□ 0.95
EPHA3P29320 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHA3P29320 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21■□□□□ 0.95
EPHA3P29320 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21■□□□□ 0.95
EPHA3P29320 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHA3P29320 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
EPHA3P29320 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21■□□□□ 0.95
EPHA3P29320 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHA3P29320 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21■□□□□ 0.95
EPHA3P29320 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.99■□□□□ 0.95
EPHA3P29320 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHA3P29320 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
EPHA3P29320 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EPHA3P29320 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EPHA3P29320 FEM1AP4-201ENST00000443167 1987 ntBASIC20.99■□□□□ 0.95
EPHA3P29320 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA3P29320 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHA3P29320 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
EPHA3P29320 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.99■□□□□ 0.95
EPHA3P29320 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA3P29320 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.98■□□□□ 0.95
EPHA3P29320 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA3P29320 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA3P29320 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA3P29320 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA3P29320 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA3P29320 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
EPHA3P29320 C17orf82-201ENST00000623772 1530 ntBASIC20.98■□□□□ 0.95
EPHA3P29320 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.98■□□□□ 0.95
EPHA3P29320 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
EPHA3P29320 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA3P29320 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHA3P29320 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA3P29320 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA3P29320 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.97■□□□□ 0.95
EPHA3P29320 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.97■□□□□ 0.95
EPHA3P29320 AC092028.1-203ENST00000608262 953 ntBASIC20.97■□□□□ 0.95
EPHA3P29320 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA3P29320 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA3P29320 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA3P29320 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA3P29320 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
EPHA3P29320 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA3P29320 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.96■□□□□ 0.95
EPHA3P29320 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHA3P29320 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHA3P29320 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.96■□□□□ 0.95
EPHA3P29320 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHA3P29320 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHA3P29320 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EPHA3P29320 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
EPHA3P29320 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.96■□□□□ 0.95
EPHA3P29320 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
EPHA3P29320 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
EPHA3P29320 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 AC026471.6-201ENST00000622954 1905 ntBASIC20.95■□□□□ 0.94
EPHA3P29320 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
EPHA3P29320 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHA3P29320 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHA3P29320 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHA3P29320 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA3P29320 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA3P29320 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA3P29320 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EPHA3P29320 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA3P29320 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA3P29320 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHA3P29320 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EPHA3P29320 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHA3P29320 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHA3P29320 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
EPHA3P29320 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.94■□□□□ 0.94
EPHA3P29320 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.94■□□□□ 0.94
EPHA3P29320 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHA3P29320 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
EPHA3P29320 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA3P29320 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHA3P29320 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA3P29320 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA3P29320 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.93■□□□□ 0.94
EPHA3P29320 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms