Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YHI9YHR029C 885 nt4.39□□□□□ -1.71
MSH1P25846 SUI2YJR007W 915 nt4.39□□□□□ -1.71
MSH1P25846 NKP2YLR315W 462 nt4.39□□□□□ -1.71
MSH1P25846 HPA2YPR193C 471 nt4.39□□□□□ -1.71
MSH1P25846 YBR141W-AYBR141W-A 96 nt4.39□□□□□ -1.71
MSH1P25846 SLX1YBR228W 915 nt4.39□□□□□ -1.71
MSH1P25846 snR44snR44 211 nt4.39□□□□□ -1.71
MSH1P25846 UBX5YDR330W 1503 nt4.39□□□□□ -1.71
MSH1P25846 UBP6YFR010W 1500 nt4.39□□□□□ -1.71
MSH1P25846 YHR202WYHR202W 1809 nt4.39□□□□□ -1.71
MSH1P25846 VPS27YNR006W 1869 nt4.39□□□□□ -1.71
MSH1P25846 FAA1YOR317W 2103 nt4.39□□□□□ -1.71
MSH1P25846 PRP3YDR473C 1410 nt4.38□□□□□ -1.71
MSH1P25846 SLI1YGR212W 1407 nt4.38□□□□□ -1.71
MSH1P25846 SSH4YKL124W 1740 nt4.38□□□□□ -1.71
MSH1P25846 PPZ1YML016C 2079 nt4.38□□□□□ -1.71
MSH1P25846 NUP133YKR082W 3474 nt4.38□□□□□ -1.71
MSH1P25846 AEP3YPL005W 1821 nt4.38□□□□□ -1.71
MSH1P25846 RPP1AYDL081C 321 nt4.38□□□□□ -1.71
MSH1P25846 YGL138CYGL138C 1038 nt4.38□□□□□ -1.71
MSH1P25846 YIL165CYIL165C 360 nt4.38□□□□□ -1.71
MSH1P25846 RFA3YJL173C 369 nt4.38□□□□□ -1.71
MSH1P25846 SOP4YJL192C 705 nt4.38□□□□□ -1.71
MSH1P25846 AHP1YLR109W 531 nt4.38□□□□□ -1.71
MSH1P25846 YNR071CYNR071C 1029 nt4.38□□□□□ -1.71
MSH1P25846 ICY2YPL250C 411 nt4.38□□□□□ -1.71
MSH1P25846 JHD2YJR119C 2187 nt4.38□□□□□ -1.71
MSH1P25846 HCM1YCR065W 1695 nt4.38□□□□□ -1.71
MSH1P25846 CEG1YGL130W 1380 nt4.38□□□□□ -1.71
MSH1P25846 MTC4YBR255W 2085 nt4.37□□□□□ -1.71
MSH1P25846 YSH1YLR277C 2340 nt4.37□□□□□ -1.71
MSH1P25846 YDL158CYDL158C 309 nt4.37□□□□□ -1.71
MSH1P25846 NOP6YDL213C 678 nt4.37□□□□□ -1.71
MSH1P25846 UBC8YEL012W 657 nt4.37□□□□□ -1.71
MSH1P25846 YER145C-AYER145C-A 438 nt4.37□□□□□ -1.71
MSH1P25846 YGL132WYGL132W 336 nt4.37□□□□□ -1.71
MSH1P25846 YPT35YHR105W 645 nt4.37□□□□□ -1.71
MSH1P25846 YIL171WYIL171W 330 nt4.37□□□□□ -1.71
MSH1P25846 YJR128WYJR128W 360 nt4.37□□□□□ -1.71
MSH1P25846 YNL057WYNL057W 333 nt4.37□□□□□ -1.71
MSH1P25846 NIS1YNL078W 1224 nt4.37□□□□□ -1.71
MSH1P25846 ERV15YBR210W 429 nt4.37□□□□□ -1.71
MSH1P25846 MRPL27YBR282W 441 nt4.37□□□□□ -1.71
MSH1P25846 NEM1YHR004C 1341 nt4.37□□□□□ -1.71
MSH1P25846 FMP25YLR077W 1752 nt4.37□□□□□ -1.71
MSH1P25846 RAD54YGL163C 2697 nt4.37□□□□□ -1.71
MSH1P25846 NHP10YDL002C 612 nt4.36□□□□□ -1.71
MSH1P25846 YGL117WYGL117W 798 nt4.36□□□□□ -1.71
MSH1P25846 GTT1YIR038C 705 nt4.36□□□□□ -1.71
MSH1P25846 ASC1YMR116C 960 nt4.36□□□□□ -1.71
MSH1P25846 IDI1YPL117C 867 nt4.36□□□□□ -1.71
MSH1P25846 DSL1YNL258C 2265 nt4.35□□□□□ -1.71
MSH1P25846 CTM1YHR109W 1758 nt4.35□□□□□ -1.71
MSH1P25846 SNU23YDL098C 585 nt4.35□□□□□ -1.71
MSH1P25846 KXD1YGL079W 657 nt4.35□□□□□ -1.71
MSH1P25846 COX18YGR062C 951 nt4.35□□□□□ -1.71
MSH1P25846 ACP1YKL192C 378 nt4.35□□□□□ -1.71
MSH1P25846 YLR339CYLR339C 552 nt4.35□□□□□ -1.71
MSH1P25846 SWC7YLR385C 399 nt4.35□□□□□ -1.71
MSH1P25846 SPC2YML055W 537 nt4.35□□□□□ -1.71
MSH1P25846 YMR099CYMR099C 894 nt4.35□□□□□ -1.71
MSH1P25846 YOL106WYOL106W 354 nt4.35□□□□□ -1.71
MSH1P25846 IPP1YBR011C 864 nt4.35□□□□□ -1.71
MSH1P25846 SFG1YOR315W 1041 nt4.35□□□□□ -1.71
MSH1P25846 MGA1YGR249W 1371 nt4.35□□□□□ -1.71
MSH1P25846 ALO1YML086C 1581 nt4.35□□□□□ -1.71
MSH1P25846 DSS1YMR287C 2910 nt4.35□□□□□ -1.71
MSH1P25846 MET12YPL023C 1974 nt4.34□□□□□ -1.71
MSH1P25846 PRP11YDL043C 801 nt4.34□□□□□ -1.71
MSH1P25846 DPB4YDR121W 591 nt4.34□□□□□ -1.71
MSH1P25846 YDR535CYDR535C 501 nt4.34□□□□□ -1.71
MSH1P25846 YGR026WYGR026W 837 nt4.34□□□□□ -1.71
MSH1P25846 RPL24BYGR148C 468 nt4.34□□□□□ -1.71
MSH1P25846 AIR1YIL079C 1083 nt4.34□□□□□ -1.71
MSH1P25846 YLR428CYLR428C 345 nt4.34□□□□□ -1.71
MSH1P25846 SAM37YMR060C 984 nt4.34□□□□□ -1.71
MSH1P25846 RPL18BYNL301C 561 nt4.34□□□□□ -1.71
MSH1P25846 TRM112YNR046W 408 nt4.34□□□□□ -1.71
MSH1P25846 SDS23YGL056C 1584 nt4.34□□□□□ -1.71
MSH1P25846 ACE2YLR131C 2313 nt4.34□□□□□ -1.72
MSH1P25846 MNR2YKL064W 2910 nt4.34□□□□□ -1.72
MSH1P25846 HMG1YML075C 3165 nt4.33□□□□□ -1.72
MSH1P25846 ABP140YOR239W 1887 nt4.33□□□□□ -1.72
MSH1P25846 DSN1YIR010W 1731 nt4.33□□□□□ -1.72
MSH1P25846 YDR131CYDR131C 1671 nt4.33□□□□□ -1.72
MSH1P25846 AI3Q0060 1248 nt4.33□□□□□ -1.72
MSH1P25846 BSC2YDR275W 708 nt4.33□□□□□ -1.72
MSH1P25846 SPI1YER150W 447 nt4.33□□□□□ -1.72
MSH1P25846 YLR156WYLR156W 345 nt4.33□□□□□ -1.72
MSH1P25846 YLR157W-DYLR157W-D 213 nt4.33□□□□□ -1.72
MSH1P25846 YLR159WYLR159W 345 nt4.33□□□□□ -1.72
MSH1P25846 YLR161WYLR161W 345 nt4.33□□□□□ -1.72
MSH1P25846 MRPL17YNL252C 846 nt4.33□□□□□ -1.72
MSH1P25846 IST1YNL265C 897 nt4.33□□□□□ -1.72
MSH1P25846 SUR1YPL057C 1149 nt4.33□□□□□ -1.72
MSH1P25846 YPR027CYPR027C 834 nt4.33□□□□□ -1.72
MSH1P25846 BCK2YER167W 2556 nt4.33□□□□□ -1.72
MSH1P25846 YOR365CYOR365C 2112 nt4.33□□□□□ -1.72
MSH1P25846 SST2YLR452C 2097 nt4.33□□□□□ -1.72
MSH1P25846 POL1YNL102W 4407 nt4.32□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms