Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
NCLP19338 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.52■■□□□ 1.68
NCLP19338 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NCLP19338 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NCLP19338 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
NCLP19338 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NCLP19338 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.52■■□□□ 1.68
NCLP19338 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.52■■□□□ 1.68
NCLP19338 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.52■■□□□ 1.68
NCLP19338 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.52■■□□□ 1.68
NCLP19338 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
NCLP19338 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.52■■□□□ 1.68
NCLP19338 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
NCLP19338 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC25.52■■□□□ 1.68
NCLP19338 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC25.52■■□□□ 1.68
NCLP19338 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.52■■□□□ 1.68
NCLP19338 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.52■■□□□ 1.68
NCLP19338 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.52■■□□□ 1.68
NCLP19338 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NCLP19338 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NCLP19338 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NCLP19338 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
NCLP19338 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
NCLP19338 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NCLP19338 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.51■■□□□ 1.67
NCLP19338 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NCLP19338 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NCLP19338 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NCLP19338 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
NCLP19338 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NCLP19338 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NCLP19338 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.5■■□□□ 1.67
NCLP19338 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
NCLP19338 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
NCLP19338 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC25.5■■□□□ 1.67
NCLP19338 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
NCLP19338 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NCLP19338 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NCLP19338 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.5■■□□□ 1.67
NCLP19338 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC25.5■■□□□ 1.67
NCLP19338 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NCLP19338 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NCLP19338 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
NCLP19338 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC25.49■■□□□ 1.67
NCLP19338 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NCLP19338 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NCLP19338 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.49■■□□□ 1.67
NCLP19338 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
NCLP19338 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NCLP19338 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.49■■□□□ 1.67
NCLP19338 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.49■■□□□ 1.67
NCLP19338 FAM99A-202ENST00000538190 1989 ntBASIC25.49■■□□□ 1.67
NCLP19338 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
NCLP19338 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.48■■□□□ 1.67
NCLP19338 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NCLP19338 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.48■■□□□ 1.67
NCLP19338 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NCLP19338 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NCLP19338 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NCLP19338 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
NCLP19338 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC25.48■■□□□ 1.67
NCLP19338 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NCLP19338 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NCLP19338 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.47■■□□□ 1.67
NCLP19338 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
NCLP19338 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.47■■□□□ 1.67
NCLP19338 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
NCLP19338 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.47■■□□□ 1.67
NCLP19338 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NCLP19338 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NCLP19338 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.46■■□□□ 1.67
NCLP19338 LINC01529-204ENST00000636474 1715 ntBASIC25.46■■□□□ 1.67
NCLP19338 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NCLP19338 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
NCLP19338 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NCLP19338 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NCLP19338 AC010997.5-201ENST00000609182 354 ntBASIC25.46■■□□□ 1.67
NCLP19338 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.46■■□□□ 1.67
NCLP19338 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NCLP19338 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
NCLP19338 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
NCLP19338 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
NCLP19338 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
NCLP19338 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC25.45■■□□□ 1.67
NCLP19338 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
NCLP19338 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.45■■□□□ 1.67
NCLP19338 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
NCLP19338 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NCLP19338 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
NCLP19338 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.45■■□□□ 1.66
NCLP19338 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.45■■□□□ 1.66
NCLP19338 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NCLP19338 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
NCLP19338 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NCLP19338 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NCLP19338 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NCLP19338 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
NCLP19338 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NCLP19338 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.44■■□□□ 1.66
NCLP19338 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms