Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 AC079140.4-201ENST00000507448 529 ntBASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB40ALP0C0E4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB40ALP0C0E4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB40ALP0C0E4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.39■□□□□ 0.86
RAB40ALP0C0E4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB40ALP0C0E4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB40ALP0C0E4 AC009237.3-201ENST00000393279 1427 ntBASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 AC080038.1-201ENST00000611274 1154 ntBASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RAB40ALP0C0E4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 ID1-201ENST00000376105 1233 ntBASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40ALP0C0E4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
RAB40ALP0C0E4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.36■□□□□ 0.85
RAB40ALP0C0E4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB40ALP0C0E4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB40ALP0C0E4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB40ALP0C0E4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB40ALP0C0E4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RAB40ALP0C0E4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB40ALP0C0E4 AC005224.4-201ENST00000583262 1652 ntBASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 KRT18P11-201ENST00000435214 1283 ntBASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.35■□□□□ 0.85
RAB40ALP0C0E4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40ALP0C0E4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms