Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 AC005703.6-201ENST00000623265 1329 ntBASIC19.35■□□□□ 0.69
HLA-DPB1P04440 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.35■□□□□ 0.69
HLA-DPB1P04440 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPB1P04440 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DPB1P04440 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DPB1P04440 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DPB1P04440 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.33■□□□□ 0.69
HLA-DPB1P04440 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DPB1P04440 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPB1P04440 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPB1P04440 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HLA-DPB1P04440 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPB1P04440 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.32■□□□□ 0.68
HLA-DPB1P04440 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DPB1P04440 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 LINC01960-201ENST00000563759 1884 ntBASIC19.31■□□□□ 0.68
HLA-DPB1P04440 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DPB1P04440 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 AL356441.2-201ENST00000443009 864 ntBASIC19.3■□□□□ 0.68
HLA-DPB1P04440 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 MIR6724-1-201ENST00000616420 92 ntBASIC19.3■□□□□ 0.68
HLA-DPB1P04440 MIR6724-2-201ENST00000616483 92 ntBASIC19.3■□□□□ 0.68
HLA-DPB1P04440 MIR6724-4-201ENST00000617390 92 ntBASIC19.3■□□□□ 0.68
HLA-DPB1P04440 MIR6724-3-201ENST00000622482 92 ntBASIC19.3■□□□□ 0.68
HLA-DPB1P04440 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPB1P04440 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DPB1P04440 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms