Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.69■■□□□ 1.06
TRBC1P01850 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRBC1P01850 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBC1P01850 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRBC1P01850 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBC1P01850 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
TRBC1P01850 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBC1P01850 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBC1P01850 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBC1P01850 AC027612.3-201ENST00000413684 1047 ntBASIC21.68■■□□□ 1.06
TRBC1P01850 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.68■■□□□ 1.06
TRBC1P01850 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.68■■□□□ 1.06
TRBC1P01850 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBC1P01850 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBC1P01850 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.68■■□□□ 1.06
TRBC1P01850 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.68■■□□□ 1.06
TRBC1P01850 AC242852.2-201ENST00000615738 1807 ntBASIC21.68■■□□□ 1.06
TRBC1P01850 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRBC1P01850 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRBC1P01850 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBC1P01850 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBC1P01850 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBC1P01850 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBC1P01850 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBC1P01850 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.67■■□□□ 1.06
TRBC1P01850 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBC1P01850 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBC1P01850 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBC1P01850 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBC1P01850 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBC1P01850 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRBC1P01850 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBC1P01850 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.66■■□□□ 1.06
TRBC1P01850 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBC1P01850 BX005040.4-201ENST00000637145 1518 ntBASIC21.66■■□□□ 1.06
TRBC1P01850 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBC1P01850 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.66■■□□□ 1.06
TRBC1P01850 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBC1P01850 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBC1P01850 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.66■■□□□ 1.06
TRBC1P01850 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBC1P01850 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBC1P01850 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBC1P01850 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBC1P01850 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBC1P01850 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBC1P01850 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.65■■□□□ 1.06
TRBC1P01850 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.65■■□□□ 1.06
TRBC1P01850 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBC1P01850 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TRBC1P01850 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.65■■□□□ 1.06
TRBC1P01850 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRBC1P01850 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.65■■□□□ 1.06
TRBC1P01850 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRBC1P01850 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TRBC1P01850 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBC1P01850 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBC1P01850 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBC1P01850 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.64■■□□□ 1.06
TRBC1P01850 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRBC1P01850 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBC1P01850 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TRBC1P01850 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.64■■□□□ 1.05
TRBC1P01850 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.64■■□□□ 1.05
TRBC1P01850 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBC1P01850 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRBC1P01850 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRBC1P01850 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBC1P01850 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBC1P01850 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBC1P01850 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
TRBC1P01850 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBC1P01850 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBC1P01850 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBC1P01850 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBC1P01850 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBC1P01850 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TRBC1P01850 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBC1P01850 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.63■■□□□ 1.05
TRBC1P01850 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.63■■□□□ 1.05
TRBC1P01850 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBC1P01850 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRBC1P01850 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBC1P01850 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBC1P01850 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.63■■□□□ 1.05
TRBC1P01850 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBC1P01850 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBC1P01850 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBC1P01850 AP004607.7-201ENST00000527152 1677 ntBASIC21.63■■□□□ 1.05
TRBC1P01850 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRBC1P01850 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBC1P01850 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBC1P01850 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBC1P01850 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBC1P01850 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TRBC1P01850 YBX1P1-201ENST00000445822 960 ntBASIC21.62■■□□□ 1.05
TRBC1P01850 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms