Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.09■□□□□ 0.33
IFNA1P01562 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.09■□□□□ 0.33
IFNA1P01562 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
IFNA1P01562 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IFNA1P01562 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
IFNA1P01562 AC090340.1-201ENST00000620778 4980 ntBASIC17.09■□□□□ 0.33
IFNA1P01562 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNA1P01562 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFNA1P01562 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFNA1P01562 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFNA1P01562 Z98882.1-201ENST00000622160 2253 ntBASIC17.08■□□□□ 0.33
IFNA1P01562 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.08■□□□□ 0.33
IFNA1P01562 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFNA1P01562 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFNA1P01562 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
IFNA1P01562 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
IFNA1P01562 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNA1P01562 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFNA1P01562 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.07■□□□□ 0.32
IFNA1P01562 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
IFNA1P01562 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNA1P01562 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFNA1P01562 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNA1P01562 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
IFNA1P01562 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNA1P01562 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNA1P01562 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNA1P01562 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFNA1P01562 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
IFNA1P01562 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IFNA1P01562 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.06■□□□□ 0.32
IFNA1P01562 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.06■□□□□ 0.32
IFNA1P01562 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 AC007952.6-201ENST00000573168 2673 ntBASIC17.06■□□□□ 0.32
IFNA1P01562 AC003957.1-201ENST00000625108 2673 ntBASIC17.06■□□□□ 0.32
IFNA1P01562 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.06■□□□□ 0.32
IFNA1P01562 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.06■□□□□ 0.32
IFNA1P01562 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.06■□□□□ 0.32
IFNA1P01562 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
IFNA1P01562 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.06■□□□□ 0.32
IFNA1P01562 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNA1P01562 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
IFNA1P01562 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.05■□□□□ 0.32
IFNA1P01562 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.05■□□□□ 0.32
IFNA1P01562 ECEL1P2-201ENST00000461596 1295 ntBASIC17.05■□□□□ 0.32
IFNA1P01562 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 AC092296.2-201ENST00000589470 999 ntBASIC17.05■□□□□ 0.32
IFNA1P01562 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 FEM1AP4-201ENST00000443167 1987 ntBASIC17.05■□□□□ 0.32
IFNA1P01562 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFNA1P01562 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.05■□□□□ 0.32
IFNA1P01562 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
IFNA1P01562 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
IFNA1P01562 AC144652.1-201ENST00000609974 1624 ntBASIC17.04■□□□□ 0.32
IFNA1P01562 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
IFNA1P01562 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.04■□□□□ 0.32
IFNA1P01562 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNA1P01562 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.04■□□□□ 0.32
IFNA1P01562 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.04■□□□□ 0.32
IFNA1P01562 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms