Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.22■■□□□ 1.15
RPP40O75818 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.22■■□□□ 1.15
RPP40O75818 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPP40O75818 BID-214ENST00000617586 542 ntTSL 5 BASIC22.22■■□□□ 1.15
RPP40O75818 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPP40O75818 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RPP40O75818 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
RPP40O75818 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
RPP40O75818 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.21■■□□□ 1.15
RPP40O75818 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RPP40O75818 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPP40O75818 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RPP40O75818 AC006970.2-201ENST00000450065 779 ntBASIC22.21■■□□□ 1.15
RPP40O75818 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.21■■□□□ 1.15
RPP40O75818 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.21■■□□□ 1.15
RPP40O75818 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.21■■□□□ 1.15
RPP40O75818 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPP40O75818 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.2■■□□□ 1.15
RPP40O75818 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP40O75818 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.2■■□□□ 1.14
RPP40O75818 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.2■■□□□ 1.14
RPP40O75818 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP40O75818 ABHD17AP1-201ENST00000358206 933 ntBASIC22.2■■□□□ 1.14
RPP40O75818 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RPP40O75818 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP40O75818 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP40O75818 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.2■■□□□ 1.14
RPP40O75818 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.2■■□□□ 1.14
RPP40O75818 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.2■■□□□ 1.14
RPP40O75818 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.19■■□□□ 1.14
RPP40O75818 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP40O75818 AL355802.2-201ENST00000402069 882 ntBASIC22.19■■□□□ 1.14
RPP40O75818 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.19■■□□□ 1.14
RPP40O75818 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RPP40O75818 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.19■■□□□ 1.14
RPP40O75818 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP40O75818 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.19■■□□□ 1.14
RPP40O75818 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.19■■□□□ 1.14
RPP40O75818 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.19■■□□□ 1.14
RPP40O75818 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RPP40O75818 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.19■■□□□ 1.14
RPP40O75818 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP40O75818 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPP40O75818 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.19■■□□□ 1.14
RPP40O75818 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.18■■□□□ 1.14
RPP40O75818 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RPP40O75818 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPP40O75818 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RPP40O75818 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPP40O75818 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
RPP40O75818 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.18■■□□□ 1.14
RPP40O75818 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.18■■□□□ 1.14
RPP40O75818 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPP40O75818 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.18■■□□□ 1.14
RPP40O75818 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.18■■□□□ 1.14
RPP40O75818 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.18■■□□□ 1.14
RPP40O75818 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.18■■□□□ 1.14
RPP40O75818 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.18■■□□□ 1.14
RPP40O75818 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RPP40O75818 TPRG1LP1-201ENST00000598702 760 ntBASIC22.18■■□□□ 1.14
RPP40O75818 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.18■■□□□ 1.14
RPP40O75818 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPP40O75818 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RPP40O75818 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.18■■□□□ 1.14
RPP40O75818 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.17■■□□□ 1.14
RPP40O75818 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RPP40O75818 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.17■■□□□ 1.14
RPP40O75818 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 AL109923.1-201ENST00000618799 583 ntBASIC22.17■■□□□ 1.14
RPP40O75818 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.17■■□□□ 1.14
RPP40O75818 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RPP40O75818 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.17■■□□□ 1.14
RPP40O75818 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPP40O75818 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RPP40O75818 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RPP40O75818 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.16■■□□□ 1.14
RPP40O75818 AP004607.4-201ENST00000530158 1459 ntBASIC22.16■■□□□ 1.14
RPP40O75818 AC004854.2-201ENST00000608450 1441 ntBASIC22.16■■□□□ 1.14
RPP40O75818 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RPP40O75818 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPP40O75818 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.16■■□□□ 1.14
RPP40O75818 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.16■■□□□ 1.14
RPP40O75818 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RPP40O75818 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
RPP40O75818 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP40O75818 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP40O75818 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPP40O75818 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.15■■□□□ 1.14
RPP40O75818 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RPP40O75818 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPP40O75818 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPP40O75818 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms