Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PFDN1O60925 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PFDN1O60925 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.39■□□□□ 0.69
PFDN1O60925 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PFDN1O60925 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PFDN1O60925 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PFDN1O60925 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.39■□□□□ 0.69
PFDN1O60925 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.39■□□□□ 0.69
PFDN1O60925 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.39■□□□□ 0.69
PFDN1O60925 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PFDN1O60925 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PFDN1O60925 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PFDN1O60925 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PFDN1O60925 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PFDN1O60925 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PFDN1O60925 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PFDN1O60925 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PFDN1O60925 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PFDN1O60925 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PFDN1O60925 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.38■□□□□ 0.69
PFDN1O60925 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PFDN1O60925 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.38■□□□□ 0.69
PFDN1O60925 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.38■□□□□ 0.69
PFDN1O60925 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.38■□□□□ 0.69
PFDN1O60925 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PFDN1O60925 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PFDN1O60925 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.37■□□□□ 0.69
PFDN1O60925 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PFDN1O60925 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PFDN1O60925 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PFDN1O60925 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PFDN1O60925 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PFDN1O60925 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PFDN1O60925 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.37■□□□□ 0.69
PFDN1O60925 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PFDN1O60925 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.36■□□□□ 0.69
PFDN1O60925 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PFDN1O60925 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 BX323043.1-201ENST00000641006 1765 ntBASIC19.36■□□□□ 0.69
PFDN1O60925 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PFDN1O60925 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
PFDN1O60925 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PFDN1O60925 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.35■□□□□ 0.69
PFDN1O60925 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PFDN1O60925 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PFDN1O60925 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PFDN1O60925 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PFDN1O60925 PCDHAC2-203ENST00000615316 3011 ntBASIC19.35■□□□□ 0.69
PFDN1O60925 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PFDN1O60925 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PFDN1O60925 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PFDN1O60925 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 AC098818.2-201ENST00000564925 2320 ntBASIC19.34■□□□□ 0.69
PFDN1O60925 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PFDN1O60925 FEM1AP1-201ENST00000431297 1995 ntBASIC19.34■□□□□ 0.69
PFDN1O60925 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PFDN1O60925 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PFDN1O60925 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PFDN1O60925 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PFDN1O60925 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.33■□□□□ 0.69
PFDN1O60925 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PFDN1O60925 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PFDN1O60925 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PFDN1O60925 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.33■□□□□ 0.69
PFDN1O60925 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PFDN1O60925 LTB4R2-202ENST00000528054 3092 ntBASIC19.33■□□□□ 0.69
PFDN1O60925 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN1O60925 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.33■□□□□ 0.68
PFDN1O60925 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
PFDN1O60925 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.33■□□□□ 0.68
PFDN1O60925 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN1O60925 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PFDN1O60925 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN1O60925 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN1O60925 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN1O60925 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN1O60925 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PFDN1O60925 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN1O60925 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.32■□□□□ 0.68
PFDN1O60925 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN1O60925 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.32■□□□□ 0.68
PFDN1O60925 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN1O60925 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN1O60925 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.32■□□□□ 0.68
PFDN1O60925 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms