Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MIR6084-201ENST00000622012 110 ntBASIC22.01■■□□□ 1.11
PRAMEF11O60813 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PRAMEF11O60813 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.01■■□□□ 1.11
PRAMEF11O60813 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRAMEF11O60813 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22■■□□□ 1.11
PRAMEF11O60813 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
PRAMEF11O60813 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRAMEF11O60813 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRAMEF11O60813 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22■■□□□ 1.11
PRAMEF11O60813 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22■■□□□ 1.11
PRAMEF11O60813 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22■■□□□ 1.11
PRAMEF11O60813 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22■■□□□ 1.11
PRAMEF11O60813 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22■■□□□ 1.11
PRAMEF11O60813 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRAMEF11O60813 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRAMEF11O60813 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRAMEF11O60813 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PRAMEF11O60813 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.99■■□□□ 1.11
PRAMEF11O60813 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.99■■□□□ 1.11
PRAMEF11O60813 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.99■■□□□ 1.11
PRAMEF11O60813 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.99■■□□□ 1.11
PRAMEF11O60813 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PRAMEF11O60813 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PRAMEF11O60813 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PRAMEF11O60813 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.98■■□□□ 1.11
PRAMEF11O60813 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PRAMEF11O60813 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PRAMEF11O60813 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.98■■□□□ 1.11
PRAMEF11O60813 BX005040.4-201ENST00000637145 1518 ntBASIC21.98■■□□□ 1.11
PRAMEF11O60813 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRAMEF11O60813 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRAMEF11O60813 AC027612.3-201ENST00000413684 1047 ntBASIC21.98■■□□□ 1.11
PRAMEF11O60813 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.98■■□□□ 1.11
PRAMEF11O60813 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PRAMEF11O60813 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.98■■□□□ 1.11
PRAMEF11O60813 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRAMEF11O60813 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF11O60813 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PRAMEF11O60813 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF11O60813 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.97■■□□□ 1.11
PRAMEF11O60813 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PRAMEF11O60813 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF11O60813 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF11O60813 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.97■■□□□ 1.11
PRAMEF11O60813 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF11O60813 AP004607.7-201ENST00000527152 1677 ntBASIC21.97■■□□□ 1.11
PRAMEF11O60813 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF11O60813 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF11O60813 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRAMEF11O60813 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.97■■□□□ 1.11
PRAMEF11O60813 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF11O60813 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.96■■□□□ 1.11
PRAMEF11O60813 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF11O60813 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.96■■□□□ 1.11
PRAMEF11O60813 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.96■■□□□ 1.11
PRAMEF11O60813 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.96■■□□□ 1.11
PRAMEF11O60813 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF11O60813 AL034346.1-201ENST00000568244 1277 ntBASIC21.96■■□□□ 1.11
PRAMEF11O60813 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.96■■□□□ 1.11
PRAMEF11O60813 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF11O60813 AC092053.2-201ENST00000640557 1818 ntBASIC21.96■■□□□ 1.11
PRAMEF11O60813 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF11O60813 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF11O60813 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRAMEF11O60813 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF11O60813 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF11O60813 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.95■■□□□ 1.1
PRAMEF11O60813 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF11O60813 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF11O60813 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PRAMEF11O60813 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRAMEF11O60813 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PRAMEF11O60813 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF11O60813 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF11O60813 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF11O60813 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PRAMEF11O60813 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.94■■□□□ 1.1
PRAMEF11O60813 TPRG1LP1-201ENST00000598702 760 ntBASIC21.94■■□□□ 1.1
PRAMEF11O60813 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.94■■□□□ 1.1
PRAMEF11O60813 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PRAMEF11O60813 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF11O60813 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF11O60813 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRAMEF11O60813 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF11O60813 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF11O60813 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF11O60813 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF11O60813 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF11O60813 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF11O60813 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms