Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.12■□□□□ 0.81
HCN1O60741 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HCN1O60741 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.11■□□□□ 0.81
HCN1O60741 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HCN1O60741 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.11■□□□□ 0.81
HCN1O60741 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.11■□□□□ 0.81
HCN1O60741 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HCN1O60741 AC026271.2-201ENST00000428091 497 ntBASIC20.11■□□□□ 0.81
HCN1O60741 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.11■□□□□ 0.81
HCN1O60741 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.11■□□□□ 0.81
HCN1O60741 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.11■□□□□ 0.81
HCN1O60741 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCN1O60741 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCN1O60741 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCN1O60741 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCN1O60741 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HCN1O60741 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCN1O60741 SLC47A1P1-202ENST00000449666 945 ntBASIC20.1■□□□□ 0.81
HCN1O60741 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.1■□□□□ 0.81
HCN1O60741 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.1■□□□□ 0.81
HCN1O60741 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCN1O60741 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.1■□□□□ 0.81
HCN1O60741 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCN1O60741 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCN1O60741 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.1■□□□□ 0.81
HCN1O60741 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.1■□□□□ 0.81
HCN1O60741 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCN1O60741 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.09■□□□□ 0.81
HCN1O60741 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCN1O60741 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.09■□□□□ 0.81
HCN1O60741 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCN1O60741 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.09■□□□□ 0.81
HCN1O60741 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCN1O60741 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.09■□□□□ 0.81
HCN1O60741 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.09■□□□□ 0.81
HCN1O60741 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HCN1O60741 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HCN1O60741 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCN1O60741 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HCN1O60741 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HCN1O60741 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCN1O60741 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCN1O60741 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HCN1O60741 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
HCN1O60741 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCN1O60741 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HCN1O60741 OR2I1P-207ENST00000453522 948 ntBASIC20.08■□□□□ 0.81
HCN1O60741 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
HCN1O60741 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HCN1O60741 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HCN1O60741 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HCN1O60741 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HCN1O60741 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HCN1O60741 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
HCN1O60741 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HCN1O60741 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
HCN1O60741 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HCN1O60741 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HCN1O60741 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HCN1O60741 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
HCN1O60741 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.07■□□□□ 0.8
HCN1O60741 MIR5787-201ENST00000611784 55 ntBASIC20.07■□□□□ 0.8
HCN1O60741 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.07■□□□□ 0.8
HCN1O60741 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HCN1O60741 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HCN1O60741 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HCN1O60741 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HCN1O60741 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
HCN1O60741 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HCN1O60741 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HCN1O60741 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.06■□□□□ 0.8
HCN1O60741 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
HCN1O60741 AC007375.3-201ENST00000600936 2314 ntBASIC20.06■□□□□ 0.8
HCN1O60741 MIR6821-201ENST00000617625 74 ntBASIC20.06■□□□□ 0.8
HCN1O60741 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HCN1O60741 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HCN1O60741 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HCN1O60741 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.05■□□□□ 0.8
HCN1O60741 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HCN1O60741 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
HCN1O60741 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms