Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GMDSO60547 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.02■□□□□ 0.63
GMDSO60547 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
GMDSO60547 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
GMDSO60547 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
GMDSO60547 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
GMDSO60547 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
GMDSO60547 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
GMDSO60547 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.01■□□□□ 0.63
GMDSO60547 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.01■□□□□ 0.63
GMDSO60547 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.01■□□□□ 0.63
GMDSO60547 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.01■□□□□ 0.63
GMDSO60547 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.01■□□□□ 0.63
GMDSO60547 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.01■□□□□ 0.63
GMDSO60547 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GMDSO60547 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GMDSO60547 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GMDSO60547 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GMDSO60547 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19■□□□□ 0.63
GMDSO60547 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
GMDSO60547 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
GMDSO60547 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19■□□□□ 0.63
GMDSO60547 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19■□□□□ 0.63
GMDSO60547 SRD5A1P1-201ENST00000442297 786 ntBASIC19■□□□□ 0.63
GMDSO60547 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19■□□□□ 0.63
GMDSO60547 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19■□□□□ 0.63
GMDSO60547 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19■□□□□ 0.63
GMDSO60547 AL512631.2-201ENST00000604634 923 ntBASIC19■□□□□ 0.63
GMDSO60547 AC009086.3-201ENST00000623486 1008 ntBASIC19■□□□□ 0.63
GMDSO60547 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19■□□□□ 0.63
GMDSO60547 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GMDSO60547 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GMDSO60547 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19■□□□□ 0.63
GMDSO60547 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GMDSO60547 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GMDSO60547 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.99■□□□□ 0.63
GMDSO60547 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.99■□□□□ 0.63
GMDSO60547 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GMDSO60547 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GMDSO60547 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GMDSO60547 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.99■□□□□ 0.63
GMDSO60547 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GMDSO60547 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.99■□□□□ 0.63
GMDSO60547 AC092171.4-201ENST00000609130 632 ntBASIC18.99■□□□□ 0.63
GMDSO60547 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.99■□□□□ 0.63
GMDSO60547 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GMDSO60547 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GMDSO60547 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GMDSO60547 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
GMDSO60547 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GMDSO60547 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.98■□□□□ 0.63
GMDSO60547 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GMDSO60547 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GMDSO60547 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.98■□□□□ 0.63
GMDSO60547 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.98■□□□□ 0.63
GMDSO60547 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.98■□□□□ 0.63
GMDSO60547 AC131212.1-201ENST00000613771 668 ntBASIC18.98■□□□□ 0.63
GMDSO60547 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.98■□□□□ 0.63
GMDSO60547 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.98■□□□□ 0.63
GMDSO60547 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.98■□□□□ 0.63
GMDSO60547 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GMDSO60547 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.98■□□□□ 0.63
GMDSO60547 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GMDSO60547 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
GMDSO60547 AC087742.1-201ENST00000575880 1738 ntBASIC18.97■□□□□ 0.63
GMDSO60547 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GMDSO60547 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GMDSO60547 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.97■□□□□ 0.63
GMDSO60547 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.97■□□□□ 0.63
GMDSO60547 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GMDSO60547 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GMDSO60547 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GMDSO60547 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
GMDSO60547 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GMDSO60547 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GMDSO60547 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.96■□□□□ 0.63
GMDSO60547 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GMDSO60547 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
GMDSO60547 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
GMDSO60547 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.96■□□□□ 0.63
GMDSO60547 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms