Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX1O43933 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX1O43933 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX1O43933 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PEX1O43933 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PEX1O43933 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PEX1O43933 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
PEX1O43933 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.94■□□□□ 0.94
PEX1O43933 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PEX1O43933 AC096631.2-201ENST00000436136 790 ntBASIC20.94■□□□□ 0.94
PEX1O43933 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.94■□□□□ 0.94
PEX1O43933 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX1O43933 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX1O43933 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX1O43933 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PEX1O43933 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PEX1O43933 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.93■□□□□ 0.94
PEX1O43933 MIR638-201ENST00000385237 100 ntBASIC20.93■□□□□ 0.94
PEX1O43933 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX1O43933 AC005229.4-201ENST00000610085 2198 ntBASIC20.93■□□□□ 0.94
PEX1O43933 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.93■□□□□ 0.94
PEX1O43933 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.92■□□□□ 0.94
PEX1O43933 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.92■□□□□ 0.94
PEX1O43933 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.92■□□□□ 0.94
PEX1O43933 AC110285.6-201ENST00000617652 491 ntBASIC20.92■□□□□ 0.94
PEX1O43933 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PEX1O43933 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX1O43933 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PEX1O43933 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PEX1O43933 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PEX1O43933 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.91■□□□□ 0.94
PEX1O43933 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.91■□□□□ 0.94
PEX1O43933 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PEX1O43933 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 AC010542.4-201ENST00000563151 1910 ntBASIC20.9■□□□□ 0.94
PEX1O43933 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PEX1O43933 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.9■□□□□ 0.94
PEX1O43933 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 SRD5A1P1-201ENST00000442297 786 ntBASIC20.9■□□□□ 0.94
PEX1O43933 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.9■□□□□ 0.94
PEX1O43933 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.9■□□□□ 0.94
PEX1O43933 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX1O43933 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PEX1O43933 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PEX1O43933 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.89■□□□□ 0.93
PEX1O43933 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.89■□□□□ 0.93
PEX1O43933 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.89■□□□□ 0.93
PEX1O43933 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
PEX1O43933 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.89■□□□□ 0.93
PEX1O43933 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PEX1O43933 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.88■□□□□ 0.93
PEX1O43933 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PEX1O43933 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PEX1O43933 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.88■□□□□ 0.93
PEX1O43933 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PEX1O43933 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.88■□□□□ 0.93
PEX1O43933 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PEX1O43933 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms