Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NCK2O43639 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.82■■□□□ 1.4
NCK2O43639 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
NCK2O43639 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NCK2O43639 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NCK2O43639 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.82■■□□□ 1.4
NCK2O43639 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
NCK2O43639 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NCK2O43639 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCK2O43639 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NCK2O43639 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCK2O43639 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.81■■□□□ 1.4
NCK2O43639 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCK2O43639 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.81■■□□□ 1.4
NCK2O43639 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCK2O43639 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCK2O43639 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCK2O43639 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.81■■□□□ 1.4
NCK2O43639 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCK2O43639 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.8■■□□□ 1.4
NCK2O43639 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCK2O43639 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCK2O43639 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.8■■□□□ 1.4
NCK2O43639 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
NCK2O43639 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
NCK2O43639 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.8■■□□□ 1.4
NCK2O43639 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.8■■□□□ 1.4
NCK2O43639 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.8■■□□□ 1.4
NCK2O43639 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.8■■□□□ 1.4
NCK2O43639 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCK2O43639 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCK2O43639 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.8■■□□□ 1.4
NCK2O43639 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCK2O43639 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NCK2O43639 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NCK2O43639 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.79■■□□□ 1.4
NCK2O43639 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NCK2O43639 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCK2O43639 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCK2O43639 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCK2O43639 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NCK2O43639 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.79■■□□□ 1.4
NCK2O43639 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.79■■□□□ 1.4
NCK2O43639 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NCK2O43639 AC079630.1-202ENST00000618127 1840 ntBASIC23.79■■□□□ 1.4
NCK2O43639 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCK2O43639 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCK2O43639 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.78■■□□□ 1.4
NCK2O43639 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.78■■□□□ 1.4
NCK2O43639 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NCK2O43639 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NCK2O43639 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCK2O43639 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NCK2O43639 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NCK2O43639 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.78■■□□□ 1.4
NCK2O43639 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCK2O43639 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCK2O43639 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.77■■□□□ 1.4
NCK2O43639 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 AC006015.1-201ENST00000429970 570 ntBASIC23.77■■□□□ 1.4
NCK2O43639 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.77■■□□□ 1.4
NCK2O43639 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.77■■□□□ 1.4
NCK2O43639 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.77■■□□□ 1.4
NCK2O43639 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCK2O43639 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.76■■□□□ 1.39
NCK2O43639 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.76■■□□□ 1.39
NCK2O43639 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NCK2O43639 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.76■■□□□ 1.39
NCK2O43639 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.76■■□□□ 1.39
NCK2O43639 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCK2O43639 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCK2O43639 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCK2O43639 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.75■■□□□ 1.39
NCK2O43639 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NCK2O43639 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NCK2O43639 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NCK2O43639 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.75■■□□□ 1.39
NCK2O43639 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCK2O43639 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NCK2O43639 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCK2O43639 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.75■■□□□ 1.39
NCK2O43639 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NCK2O43639 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.75■■□□□ 1.39
NCK2O43639 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.75■■□□□ 1.39
NCK2O43639 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCK2O43639 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NCK2O43639 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.75■■□□□ 1.39
NCK2O43639 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.75■■□□□ 1.39
NCK2O43639 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NCK2O43639 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NCK2O43639 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms