Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RRP8O43159 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RRP8O43159 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RRP8O43159 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RRP8O43159 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RRP8O43159 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RRP8O43159 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RRP8O43159 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.38■□□□□ 0.85
RRP8O43159 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 CNN2P6-201ENST00000439038 900 ntBASIC20.38■□□□□ 0.85
RRP8O43159 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RRP8O43159 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RRP8O43159 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RRP8O43159 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.37■□□□□ 0.85
RRP8O43159 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.37■□□□□ 0.85
RRP8O43159 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RRP8O43159 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RRP8O43159 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.37■□□□□ 0.85
RRP8O43159 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.37■□□□□ 0.85
RRP8O43159 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.37■□□□□ 0.85
RRP8O43159 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.37■□□□□ 0.85
RRP8O43159 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.37■□□□□ 0.85
RRP8O43159 AC010536.3-201ENST00000620306 533 ntBASIC20.37■□□□□ 0.85
RRP8O43159 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.37■□□□□ 0.85
RRP8O43159 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RRP8O43159 MKRN4P-201ENST00000444706 1521 ntBASIC20.37■□□□□ 0.85
RRP8O43159 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RRP8O43159 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RRP8O43159 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RRP8O43159 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RRP8O43159 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.36■□□□□ 0.85
RRP8O43159 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.36■□□□□ 0.85
RRP8O43159 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.36■□□□□ 0.85
RRP8O43159 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RRP8O43159 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.36■□□□□ 0.85
RRP8O43159 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RRP8O43159 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.36■□□□□ 0.85
RRP8O43159 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RRP8O43159 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RRP8O43159 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RRP8O43159 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RRP8O43159 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RRP8O43159 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RRP8O43159 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RRP8O43159 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RRP8O43159 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RRP8O43159 MIPEPP3-201ENST00000412105 444 ntBASIC20.35■□□□□ 0.85
RRP8O43159 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.35■□□□□ 0.85
RRP8O43159 RPS2P4-201ENST00000476944 856 ntBASIC20.35■□□□□ 0.85
RRP8O43159 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.35■□□□□ 0.85
RRP8O43159 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RRP8O43159 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.35■□□□□ 0.85
RRP8O43159 SLC7A5P1-201ENST00000568957 537 ntBASIC20.35■□□□□ 0.85
RRP8O43159 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RRP8O43159 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.35■□□□□ 0.85
RRP8O43159 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RRP8O43159 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.35■□□□□ 0.85
RRP8O43159 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RRP8O43159 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RRP8O43159 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RRP8O43159 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RRP8O43159 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.34■□□□□ 0.85
RRP8O43159 GCSHP5-201ENST00000443090 522 ntBASIC20.34■□□□□ 0.85
RRP8O43159 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RRP8O43159 AC013268.1-206ENST00000638368 961 ntBASIC20.34■□□□□ 0.85
RRP8O43159 AC112229.1-201ENST00000639295 961 ntBASIC20.34■□□□□ 0.85
RRP8O43159 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RRP8O43159 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RRP8O43159 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RRP8O43159 AL158047.1-201ENST00000445918 881 ntBASIC20.33■□□□□ 0.85
RRP8O43159 AC098590.1-201ENST00000468126 897 ntBASIC20.33■□□□□ 0.85
RRP8O43159 RARRES2P4-201ENST00000514074 484 ntBASIC20.33■□□□□ 0.85
RRP8O43159 KRT18P20-201ENST00000548986 1279 ntBASIC20.33■□□□□ 0.85
RRP8O43159 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RRP8O43159 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.33■□□□□ 0.84
RRP8O43159 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RRP8O43159 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.32■□□□□ 0.84
RRP8O43159 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.32■□□□□ 0.84
RRP8O43159 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RRP8O43159 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RRP8O43159 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RRP8O43159 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.32■□□□□ 0.84
RRP8O43159 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RRP8O43159 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.32■□□□□ 0.84
RRP8O43159 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.32■□□□□ 0.84
RRP8O43159 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.32■□□□□ 0.84
RRP8O43159 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RRP8O43159 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.32■□□□□ 0.84
RRP8O43159 AC008694.1-202ENST00000636953 945 ntBASIC20.32■□□□□ 0.84
RRP8O43159 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RRP8O43159 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RRP8O43159 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms