Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.23■□□□□ 0.83
SNPHO15079 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNPHO15079 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.23■□□□□ 0.83
SNPHO15079 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNPHO15079 SUDS3P1-201ENST00000505831 966 ntBASIC20.23■□□□□ 0.83
SNPHO15079 AP001330.3-201ENST00000520123 633 ntBASIC20.23■□□□□ 0.83
SNPHO15079 AC142381.2-201ENST00000566120 298 ntBASIC20.23■□□□□ 0.83
SNPHO15079 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.23■□□□□ 0.83
SNPHO15079 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNPHO15079 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNPHO15079 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SNPHO15079 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SNPHO15079 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 RNF165-205ENST00000588679 2904 ntBASIC20.22■□□□□ 0.83
SNPHO15079 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.22■□□□□ 0.83
SNPHO15079 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.22■□□□□ 0.83
SNPHO15079 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SNPHO15079 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.22■□□□□ 0.83
SNPHO15079 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SNPHO15079 AF213884.3-201ENST00000563833 479 ntBASIC20.22■□□□□ 0.83
SNPHO15079 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SNPHO15079 GUSBP5-202ENST00000510805 1989 ntBASIC20.22■□□□□ 0.83
SNPHO15079 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNPHO15079 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.21■□□□□ 0.83
SNPHO15079 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.21■□□□□ 0.83
SNPHO15079 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SNPHO15079 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SNPHO15079 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNPHO15079 MIR935-201ENST00000401179 91 ntBASIC20.21■□□□□ 0.83
SNPHO15079 MIR939-201ENST00000401314 82 ntBASIC20.21■□□□□ 0.83
SNPHO15079 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SNPHO15079 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.21■□□□□ 0.83
SNPHO15079 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNPHO15079 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNPHO15079 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNPHO15079 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNPHO15079 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SNPHO15079 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.21■□□□□ 0.83
SNPHO15079 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNPHO15079 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNPHO15079 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNPHO15079 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SNPHO15079 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.21■□□□□ 0.83
SNPHO15079 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNPHO15079 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNPHO15079 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNPHO15079 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNPHO15079 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNPHO15079 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.2■□□□□ 0.82
SNPHO15079 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.2■□□□□ 0.82
SNPHO15079 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.2■□□□□ 0.82
SNPHO15079 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNPHO15079 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNPHO15079 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.19■□□□□ 0.82
SNPHO15079 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.19■□□□□ 0.82
SNPHO15079 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SNPHO15079 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SNPHO15079 BX842568.3-201ENST00000418104 571 ntBASIC20.19■□□□□ 0.82
SNPHO15079 AC091305.1-201ENST00000479476 895 ntBASIC20.19■□□□□ 0.82
SNPHO15079 AC027682.1-201ENST00000562846 899 ntBASIC20.19■□□□□ 0.82
SNPHO15079 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNPHO15079 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SNPHO15079 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.18■□□□□ 0.82
SNPHO15079 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNPHO15079 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNPHO15079 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.18■□□□□ 0.82
SNPHO15079 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.18■□□□□ 0.82
SNPHO15079 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SNPHO15079 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.18■□□□□ 0.82
SNPHO15079 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNPHO15079 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNPHO15079 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNPHO15079 OR2I1P-207ENST00000453522 948 ntBASIC20.18■□□□□ 0.82
SNPHO15079 AL136967.2-201ENST00000623968 743 ntBASIC20.18■□□□□ 0.82
SNPHO15079 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.18■□□□□ 0.82
SNPHO15079 ECEL1P1-201ENST00000373592 1742 ntBASIC20.18■□□□□ 0.82
SNPHO15079 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNPHO15079 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNPHO15079 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms