Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC139530.1-201ENST00000575312 1977 ntBASIC20.35■□□□□ 0.85
CLDN4O14493 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN4O14493 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CLDN4O14493 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLDN4O14493 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN4O14493 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN4O14493 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN4O14493 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLDN4O14493 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CLDN4O14493 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN4O14493 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN4O14493 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN4O14493 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.34■□□□□ 0.85
CLDN4O14493 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN4O14493 PKD1P6-201ENST00000343738 4769 ntBASIC20.34■□□□□ 0.85
CLDN4O14493 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN4O14493 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLDN4O14493 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN4O14493 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CLDN4O14493 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN4O14493 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN4O14493 LINC00526-201ENST00000581067 1875 ntBASIC20.33■□□□□ 0.85
CLDN4O14493 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN4O14493 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN4O14493 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN4O14493 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN4O14493 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN4O14493 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN4O14493 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.33■□□□□ 0.84
CLDN4O14493 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN4O14493 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN4O14493 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN4O14493 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLDN4O14493 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.32■□□□□ 0.84
CLDN4O14493 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN4O14493 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.32■□□□□ 0.84
CLDN4O14493 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN4O14493 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN4O14493 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN4O14493 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.31■□□□□ 0.84
CLDN4O14493 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN4O14493 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CLDN4O14493 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN4O14493 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN4O14493 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN4O14493 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN4O14493 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN4O14493 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN4O14493 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN4O14493 AL034346.1-201ENST00000568244 1277 ntBASIC20.31■□□□□ 0.84
CLDN4O14493 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN4O14493 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN4O14493 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN4O14493 BX005040.4-201ENST00000637145 1518 ntBASIC20.31■□□□□ 0.84
CLDN4O14493 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN4O14493 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN4O14493 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN4O14493 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN4O14493 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN4O14493 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN4O14493 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN4O14493 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN4O14493 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN4O14493 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLDN4O14493 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN4O14493 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN4O14493 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN4O14493 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN4O14493 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN4O14493 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN4O14493 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CLDN4O14493 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CLDN4O14493 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN4O14493 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN4O14493 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN4O14493 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN4O14493 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN4O14493 AC242852.2-201ENST00000615738 1807 ntBASIC20.29■□□□□ 0.84
CLDN4O14493 AC080038.3-201ENST00000623346 1952 ntBASIC20.28■□□□□ 0.84
CLDN4O14493 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLDN4O14493 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLDN4O14493 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.28■□□□□ 0.84
CLDN4O14493 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms