Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 DUSP8P4-201ENST00000399538 1761 ntBASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 AC092803.2-201ENST00000564287 1899 ntBASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
C1QTNF9BB2RNN3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 AC144652.1-201ENST00000609974 1624 ntBASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 AC016405.3-201ENST00000607710 860 ntBASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 OR10C1-204ENST00000622521 1039 ntBASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.53■□□□□ 0.88
C1QTNF9BB2RNN3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 HLA-L-211ENST00000482052 1765 ntBASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
C1QTNF9BB2RNN3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
C1QTNF9BB2RNN3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 SNORA78-201ENST00000459373 127 ntBASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF9BB2RNN3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 TERF1P5-201ENST00000477545 1207 ntBASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 AP003097.1-201ENST00000530657 1135 ntBASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 AC008694.1-202ENST00000636953 945 ntBASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C1QTNF9BB2RNN3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 AC091874.3-201ENST00000512672 1195 ntBASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1QTNF9BB2RNN3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.48■□□□□ 0.87
C1QTNF9BB2RNN3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
C1QTNF9BB2RNN3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
C1QTNF9BB2RNN3 AL512625.2-201ENST00000417533 625 ntBASIC20.48■□□□□ 0.87
C1QTNF9BB2RNN3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.48■□□□□ 0.87
C1QTNF9BB2RNN3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.48■□□□□ 0.87
C1QTNF9BB2RNN3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
C1QTNF9BB2RNN3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
C1QTNF9BB2RNN3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms