Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV20A0A0B4J274 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRAV20A0A0B4J274 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV20A0A0B4J274 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV20A0A0B4J274 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV20A0A0B4J274 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 MIR6084-201ENST00000622012 110 ntBASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV20A0A0B4J274 AC007375.3-201ENST00000600936 2314 ntBASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV20A0A0B4J274 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 KRT18P5-201ENST00000436075 1291 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DUX4L2-201ENST00000561772 1275 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DUX4L6-201ENST00000626483 1275 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DUX4L1-201ENST00000627662 1275 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DUX4L8-201ENST00000629013 1275 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DUX4L3-201ENST00000630187 1275 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DUX4L7-201ENST00000630678 1275 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 DUX4L5-201ENST00000630834 1275 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 AL031602.1-201ENST00000633169 911 ntBASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV20A0A0B4J274 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 AL139125.2-201ENST00000623134 1869 ntBASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 LINC02228-203ENST00000641970 1355 ntBASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 AL137784.2-201ENST00000607332 1000 ntBASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV20A0A0B4J274 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms