Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01558Q9Y6Z2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01558Q9Y6Z2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01558Q9Y6Z2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01558Q9Y6Z2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01558Q9Y6Z2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LINC01558Q9Y6Z2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01558Q9Y6Z2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01558Q9Y6Z2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC01558Q9Y6Z2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01558Q9Y6Z2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01558Q9Y6Z2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC01558Q9Y6Z2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01558Q9Y6Z2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01558Q9Y6Z2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01558Q9Y6Z2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01558Q9Y6Z2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01558Q9Y6Z2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01558Q9Y6Z2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01558Q9Y6Z2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01558Q9Y6Z2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01558Q9Y6Z2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01558Q9Y6Z2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01558Q9Y6Z2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01558Q9Y6Z2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01558Q9Y6Z2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01558Q9Y6Z2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01558Q9Y6Z2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01558Q9Y6Z2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC01558Q9Y6Z2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINC01558Q9Y6Z2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01558Q9Y6Z2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01558Q9Y6Z2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01558Q9Y6Z2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01558Q9Y6Z2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
LINC01558Q9Y6Z2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01558Q9Y6Z2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01558Q9Y6Z2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01558Q9Y6Z2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LINC01558Q9Y6Z2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 AC142086.6-201ENST00000621154 1765 ntBASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01558Q9Y6Z2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01558Q9Y6Z2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01558Q9Y6Z2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01558Q9Y6Z2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01558Q9Y6Z2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01558Q9Y6Z2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01558Q9Y6Z2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01558Q9Y6Z2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01558Q9Y6Z2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01558Q9Y6Z2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01558Q9Y6Z2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01558Q9Y6Z2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC01558Q9Y6Z2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01558Q9Y6Z2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01558Q9Y6Z2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01558Q9Y6Z2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01558Q9Y6Z2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01558Q9Y6Z2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01558Q9Y6Z2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms