Protein–RNA interactions for Protein: Q9NUS5

AP5S1, AP-5 complex subunit sigma-1, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP5S1Q9NUS5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP5S1Q9NUS5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP5S1Q9NUS5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP5S1Q9NUS5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP5S1Q9NUS5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP5S1Q9NUS5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP5S1Q9NUS5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP5S1Q9NUS5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP5S1Q9NUS5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP5S1Q9NUS5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP5S1Q9NUS5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.93■□□□□ 0.78
AP5S1Q9NUS5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP5S1Q9NUS5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP5S1Q9NUS5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP5S1Q9NUS5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
AP5S1Q9NUS5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP5S1Q9NUS5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP5S1Q9NUS5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP5S1Q9NUS5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP5S1Q9NUS5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP5S1Q9NUS5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP5S1Q9NUS5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP5S1Q9NUS5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
AP5S1Q9NUS5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
AP5S1Q9NUS5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP5S1Q9NUS5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP5S1Q9NUS5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
AP5S1Q9NUS5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
AP5S1Q9NUS5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
AP5S1Q9NUS5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP5S1Q9NUS5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP5S1Q9NUS5 AC120057.4-201ENST00000624722 1615 ntBASIC19.84■□□□□ 0.77
AP5S1Q9NUS5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP5S1Q9NUS5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.83■□□□□ 0.77
AP5S1Q9NUS5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP5S1Q9NUS5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP5S1Q9NUS5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP5S1Q9NUS5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP5S1Q9NUS5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP5S1Q9NUS5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP5S1Q9NUS5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP5S1Q9NUS5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP5S1Q9NUS5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP5S1Q9NUS5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.8■□□□□ 0.76
AP5S1Q9NUS5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
AP5S1Q9NUS5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP5S1Q9NUS5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP5S1Q9NUS5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.8■□□□□ 0.76
AP5S1Q9NUS5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP5S1Q9NUS5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP5S1Q9NUS5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
AP5S1Q9NUS5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP5S1Q9NUS5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP5S1Q9NUS5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
AP5S1Q9NUS5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP5S1Q9NUS5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP5S1Q9NUS5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP5S1Q9NUS5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP5S1Q9NUS5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP5S1Q9NUS5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP5S1Q9NUS5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP5S1Q9NUS5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP5S1Q9NUS5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP5S1Q9NUS5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
AP5S1Q9NUS5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP5S1Q9NUS5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP5S1Q9NUS5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.74■□□□□ 0.75
AP5S1Q9NUS5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.74■□□□□ 0.75
AP5S1Q9NUS5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
AP5S1Q9NUS5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.72■□□□□ 0.75
AP5S1Q9NUS5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
AP5S1Q9NUS5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP5S1Q9NUS5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP5S1Q9NUS5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP5S1Q9NUS5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP5S1Q9NUS5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
AP5S1Q9NUS5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP5S1Q9NUS5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP5S1Q9NUS5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP5S1Q9NUS5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP5S1Q9NUS5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.68■□□□□ 0.74
AP5S1Q9NUS5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP5S1Q9NUS5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.67■□□□□ 0.74
AP5S1Q9NUS5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.66■□□□□ 0.74
AP5S1Q9NUS5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP5S1Q9NUS5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP5S1Q9NUS5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP5S1Q9NUS5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.65■□□□□ 0.74
AP5S1Q9NUS5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP5S1Q9NUS5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.65■□□□□ 0.74
AP5S1Q9NUS5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP5S1Q9NUS5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.64■□□□□ 0.73
AP5S1Q9NUS5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
AP5S1Q9NUS5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP5S1Q9NUS5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP5S1Q9NUS5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.62■□□□□ 0.73
AP5S1Q9NUS5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.62■□□□□ 0.73
AP5S1Q9NUS5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP5S1Q9NUS5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
AP5S1Q9NUS5 AC142086.6-201ENST00000621154 1765 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms