Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LCE3DQ9BYE3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC7.34□□□□□ -1.24
LCE3DQ9BYE3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
LCE3DQ9BYE3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
LCE3DQ9BYE3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
LCE3DQ9BYE3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LCE3DQ9BYE3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LCE3DQ9BYE3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
LCE3DQ9BYE3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LCE3DQ9BYE3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LCE3DQ9BYE3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LCE3DQ9BYE3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LCE3DQ9BYE3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LCE3DQ9BYE3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LCE3DQ9BYE3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LCE3DQ9BYE3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LCE3DQ9BYE3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LCE3DQ9BYE3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LCE3DQ9BYE3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LCE3DQ9BYE3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
LCE3DQ9BYE3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
LCE3DQ9BYE3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC7.3□□□□□ -1.24
LCE3DQ9BYE3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LCE3DQ9BYE3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LCE3DQ9BYE3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LCE3DQ9BYE3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LCE3DQ9BYE3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LCE3DQ9BYE3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
LCE3DQ9BYE3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC7.29□□□□□ -1.24
LCE3DQ9BYE3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LCE3DQ9BYE3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LCE3DQ9BYE3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
LCE3DQ9BYE3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.24
LCE3DQ9BYE3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC7.27□□□□□ -1.25
LCE3DQ9BYE3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
LCE3DQ9BYE3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LCE3DQ9BYE3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
LCE3DQ9BYE3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
LCE3DQ9BYE3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
LCE3DQ9BYE3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC7.27□□□□□ -1.25
LCE3DQ9BYE3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LCE3DQ9BYE3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
LCE3DQ9BYE3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC7.26□□□□□ -1.25
LCE3DQ9BYE3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LCE3DQ9BYE3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LCE3DQ9BYE3 AC139426.1-201ENST00000568218 2529 ntBASIC7.26□□□□□ -1.25
LCE3DQ9BYE3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LCE3DQ9BYE3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
LCE3DQ9BYE3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LCE3DQ9BYE3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LCE3DQ9BYE3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC7.25□□□□□ -1.25
LCE3DQ9BYE3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC7.25□□□□□ -1.25
LCE3DQ9BYE3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC7.25□□□□□ -1.25
LCE3DQ9BYE3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LCE3DQ9BYE3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LCE3DQ9BYE3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LCE3DQ9BYE3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
LCE3DQ9BYE3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LCE3DQ9BYE3 AC120057.4-201ENST00000624722 1615 ntBASIC7.23□□□□□ -1.25
LCE3DQ9BYE3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LCE3DQ9BYE3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LCE3DQ9BYE3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
LCE3DQ9BYE3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LCE3DQ9BYE3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LCE3DQ9BYE3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LCE3DQ9BYE3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LCE3DQ9BYE3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LCE3DQ9BYE3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC7.22□□□□□ -1.25
LCE3DQ9BYE3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
LCE3DQ9BYE3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LCE3DQ9BYE3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
LCE3DQ9BYE3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LCE3DQ9BYE3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LCE3DQ9BYE3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC7.21□□□□□ -1.26
LCE3DQ9BYE3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LCE3DQ9BYE3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC7.21□□□□□ -1.26
LCE3DQ9BYE3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LCE3DQ9BYE3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LCE3DQ9BYE3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
LCE3DQ9BYE3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
LCE3DQ9BYE3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
LCE3DQ9BYE3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LCE3DQ9BYE3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
LCE3DQ9BYE3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LCE3DQ9BYE3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
LCE3DQ9BYE3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms