Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LRTM2Q8N967 AC139426.1-201ENST00000568218 2529 ntBASIC22.33■■□□□ 1.17
LRTM2Q8N967 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LRTM2Q8N967 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRTM2Q8N967 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRTM2Q8N967 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRTM2Q8N967 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRTM2Q8N967 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
LRTM2Q8N967 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRTM2Q8N967 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.29■■□□□ 1.16
LRTM2Q8N967 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRTM2Q8N967 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRTM2Q8N967 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRTM2Q8N967 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRTM2Q8N967 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
LRTM2Q8N967 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LRTM2Q8N967 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC22.25■■□□□ 1.15
LRTM2Q8N967 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRTM2Q8N967 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRTM2Q8N967 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LRTM2Q8N967 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
LRTM2Q8N967 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRTM2Q8N967 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRTM2Q8N967 ST7-AS1-201ENST00000456775 1889 ntBASIC22.23■■□□□ 1.15
LRTM2Q8N967 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LRTM2Q8N967 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC22.22■■□□□ 1.15
LRTM2Q8N967 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LRTM2Q8N967 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.15
LRTM2Q8N967 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRTM2Q8N967 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.19■■□□□ 1.14
LRTM2Q8N967 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRTM2Q8N967 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
LRTM2Q8N967 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM2Q8N967 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRTM2Q8N967 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.16■■□□□ 1.14
LRTM2Q8N967 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.16■■□□□ 1.14
LRTM2Q8N967 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRTM2Q8N967 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
LRTM2Q8N967 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRTM2Q8N967 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRTM2Q8N967 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRTM2Q8N967 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LRTM2Q8N967 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
LRTM2Q8N967 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRTM2Q8N967 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRTM2Q8N967 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRTM2Q8N967 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRTM2Q8N967 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.11■■□□□ 1.13
LRTM2Q8N967 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.1■■□□□ 1.13
LRTM2Q8N967 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.1■■□□□ 1.13
LRTM2Q8N967 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.1■■□□□ 1.13
LRTM2Q8N967 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM2Q8N967 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRTM2Q8N967 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRTM2Q8N967 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
LRTM2Q8N967 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.08■■□□□ 1.13
LRTM2Q8N967 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LRTM2Q8N967 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
LRTM2Q8N967 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM2Q8N967 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.06■■□□□ 1.12
LRTM2Q8N967 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
LRTM2Q8N967 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
LRTM2Q8N967 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRTM2Q8N967 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.03■■□□□ 1.12
LRTM2Q8N967 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRTM2Q8N967 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRTM2Q8N967 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRTM2Q8N967 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRTM2Q8N967 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.02■■□□□ 1.12
LRTM2Q8N967 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRTM2Q8N967 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LRTM2Q8N967 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
LRTM2Q8N967 AC142086.6-201ENST00000621154 1765 ntBASIC21.99■■□□□ 1.11
LRTM2Q8N967 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.99■■□□□ 1.11
LRTM2Q8N967 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.99■■□□□ 1.11
LRTM2Q8N967 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRTM2Q8N967 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRTM2Q8N967 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRTM2Q8N967 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.98■■□□□ 1.11
LRTM2Q8N967 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.98■■□□□ 1.11
LRTM2Q8N967 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRTM2Q8N967 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRTM2Q8N967 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRTM2Q8N967 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRTM2Q8N967 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRTM2Q8N967 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRTM2Q8N967 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRTM2Q8N967 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.95■■□□□ 1.1
LRTM2Q8N967 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRTM2Q8N967 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRTM2Q8N967 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRTM2Q8N967 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRTM2Q8N967 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRTM2Q8N967 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.93■■□□□ 1.1
LRTM2Q8N967 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRTM2Q8N967 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRTM2Q8N967 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
LRTM2Q8N967 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRTM2Q8N967 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRTM2Q8N967 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms