Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC40.87■■■■■ 4.134e-8■■■■■ 30
PABPN1Q86U42 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC40.02■■■■■ 44e-8■■■■■ 30
PABPN1Q86U42 CD99-207ENST00000482293 466 ntTSL 239.5■■■■□ 3.914e-8■■■■■ 30
PABPN1Q86U42 CD99-206ENST00000449611 604 ntAPPRIS ALT2 TSL 537.71■■■■□ 3.634e-8■■■■■ 30
PABPN1Q86U42 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC37.01■■■■□ 3.524e-8■■■■■ 30
PABPN1Q86U42 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC34.45■■■■□ 3.114e-8■■■■■ 30
PABPN1Q86U42 CD99-211ENST00000623253 573 ntTSL 1 (best)34.36■■■■□ 3.094e-8■■■■■ 30
PABPN1Q86U42 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.014e-8■■■■■ 30
PABPN1Q86U42 MRPL28-206ENST00000450882 619 ntTSL 331.64■■■□□ 2.664e-8■■■■■ 30
PABPN1Q86U42 HOOK2-214ENST00000589915 264 ntTSL 228.69■■■□□ 2.184e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-215ENST00000496381 858 ntTSL 325.63■■□□□ 1.694e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-216ENST00000498525 777 ntTSL 525.31■■□□□ 1.644e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.414e-8■■■■■ 30
PABPN1Q86U42 ABCC3-205ENST00000503337 2277 ntTSL 1 (best)22.79■■□□□ 1.244e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC22.37■■□□□ 1.174e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC20.79■□□□□ 0.924e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC20.66■□□□□ 0.94e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-204ENST00000427097 974 ntTSL 518.9■□□□□ 0.624e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-213ENST00000482967 840 ntTSL 318.65■□□□□ 0.584e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-212ENST00000481964 945 ntTSL 518.65■□□□□ 0.584e-8■■■■■ 30
PABPN1Q86U42 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.484e-8■■■■■ 30
PABPN1Q86U42 CLASRP-209ENST00000588016 967 ntTSL 217.5■□□□□ 0.394e-8■■■■■ 30
PABPN1Q86U42 ABCC3-203ENST00000502426 5326 ntTSL 217.45■□□□□ 0.384e-8■■■■■ 30
PABPN1Q86U42 ABCC3-207ENST00000505699 5271 ntTSL 217.38■□□□□ 0.374e-8■■■■■ 30
PABPN1Q86U42 CD99-201ENST00000381177 756 ntTSL 217.06■□□□□ 0.324e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-207ENST00000461710 2650 ntTSL 216.86■□□□□ 0.294e-8■■■■■ 30
PABPN1Q86U42 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.231e-6■■■■■ 30
PABPN1Q86U42 VARS2-206ENST00000473916 2000 ntTSL 231.37■■■□□ 2.612e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-208ENST00000590994 883 ntTSL 529.43■■■□□ 2.37e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-206ENST00000587439 2758 ntTSL 226.3■■□□□ 1.87e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-205ENST00000585968 2762 ntTSL 1 (best)24.38■■□□□ 1.497e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-202ENST00000424522 4462 ntTSL 519.29■□□□□ 0.687e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.367e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-203ENST00000428854 4387 ntTSL 516.89■□□□□ 0.297e-7■■■■■ 29.9
PABPN1Q86U42 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC16.28■□□□□ 0.21e-14■■■■■ 29.9
PABPN1Q86U42 POLE-210ENST00000537064 8011 ntTSL 1 (best)14.15□□□□□ -0.141e-6■■■■■ 29.8
PABPN1Q86U42 COL27A1-205ENST00000485397 463 ntTSL 540.3■■■■■ 4.043e-11■■■■■ 29.8
PABPN1Q86U42 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.772e-8■■■■■ 29.7
PABPN1Q86U42 RNF216-201ENST00000389900 3104 ntTSL 1 (best)14.42□□□□□ -0.12e-8■■■■■ 29.7
PABPN1Q86U42 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.799e-7■■■■■ 29.6
PABPN1Q86U42 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.849e-7■■■■■ 29.6
PABPN1Q86U42 VARS-221ENST00000463184 619 ntTSL 241.71■■■■■ 4.277e-9■■■■■ 29.6
PABPN1Q86U42 POLE-206ENST00000534922 1660 ntTSL 334.73■■■■□ 3.157e-7■■■■■ 29.6
PABPN1Q86U42 MARCH6-214ENST00000606497 1334 ntTSL 418.38■□□□□ 0.531e-6■■■■■ 29.6
PABPN1Q86U42 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.081e-6■■■■■ 29.6
PABPN1Q86U42 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC30.12■■■□□ 2.412e-7■■■■■ 29.5
PABPN1Q86U42 COL7A1-209ENST00000474432 728 ntTSL 338.26■■■■□ 3.721e-9■■■■■ 29.5
PABPN1Q86U42 RTEL1-210ENST00000496816 2222 ntTSL 1 (best)31.29■■■□□ 2.62e-7■■■■■ 29.4
PABPN1Q86U42 PSMC5-217ENST00000584536 804 ntTSL 524.87■■□□□ 1.574e-7■■■■■ 29.3
PABPN1Q86U42 PSMC5-204ENST00000579031 772 ntTSL 223.21■■□□□ 1.314e-7■■■■■ 29.3
PABPN1Q86U42 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.69e-7■■■■■ 29.3
PABPN1Q86U42 POLE-221ENST00000544870 659 ntTSL 334.06■■■■□ 3.041e-6■■■■■ 29
PABPN1Q86U42 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.281e-6■■■■■ 29
PABPN1Q86U42 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC47.91■■■■■ 5.261e-6■■■■■ 29
PABPN1Q86U42 CARS2-206ENST00000481787 1223 ntTSL 535.45■■■■□ 3.271e-6■■■■■ 29
PABPN1Q86U42 CARS2-208ENST00000487253 844 ntTSL 533.78■■■■□ 31e-6■■■■■ 29
PABPN1Q86U42 CARS2-229ENST00000542774 647 ntTSL 233.58■■■□□ 2.971e-6■■■■■ 29
PABPN1Q86U42 CARS2-220ENST00000540006 1485 ntTSL 231.92■■■□□ 2.71e-6■■■■■ 29
PABPN1Q86U42 CARS2-210ENST00000535516 2313 ntTSL 527.31■■□□□ 1.961e-6■■■■■ 29
PABPN1Q86U42 CARS2-202ENST00000375781 2747 ntTSL 222.46■■□□□ 1.191e-6■■■■■ 29
PABPN1Q86U42 CARS2-217ENST00000537802 3225 ntTSL 220.46■□□□□ 0.871e-6■■■■■ 29
PABPN1Q86U42 CARS2-224ENST00000541239 3516 ntTSL 217.84■□□□□ 0.451e-6■■■■■ 29
PABPN1Q86U42 ANO9-202ENST00000524802 671 ntTSL 1 (best)29.63■■■□□ 2.338e-8■■■■■ 29
PABPN1Q86U42 MAP4K2-212ENST00000489952 1468 ntTSL 549.14■■■■■ 5.468e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-216ENST00000496861 1351 ntTSL 1 (best)48■■■■■ 5.278e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC47.97■■■■■ 5.278e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-203ENST00000424945 1175 ntTSL 543.21■■■■■ 4.518e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-210ENST00000470088 1805 ntTSL 541.82■■■■■ 4.298e-8■■■■■ 28.9
PABPN1Q86U42 MXD3-204ENST00000502529 440 ntTSL 340.65■■■■■ 4.18e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-207ENST00000498685 1392 ntTSL 235.17■■■■□ 3.228e-8■■■■■ 28.9
PABPN1Q86U42 ENSA-205ENST00000361532 792 ntTSL 2 BASIC34.77■■■■□ 3.168e-8■■■■■ 28.9
PABPN1Q86U42 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC33.73■■■□□ 2.996e-15■■■■■ 28.9
PABPN1Q86U42 MXD3-209ENST00000513169 555 ntTSL 533.65■■■□□ 2.988e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-203ENST00000466860 1709 ntTSL 532.58■■■□□ 2.818e-8■■■■■ 28.9
PABPN1Q86U42 CTDSP1-209ENST00000488627 1118 ntTSL 331.97■■■□□ 2.716e-15■■■■■ 28.9
PABPN1Q86U42 MAP4K2-204ENST00000433890 2410 ntTSL 531.9■■■□□ 2.78e-8■■■■■ 28.9
PABPN1Q86U42 ENSA-206ENST00000361631 725 ntTSL 2 BASIC31.89■■■□□ 2.78e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-204ENST00000478299 595 ntTSL 230.63■■■□□ 2.498e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.468e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.158e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-202ENST00000460823 955 ntTSL 527.94■■■□□ 2.068e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC27.66■■■□□ 2.028e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC27.16■■□□□ 1.948e-8■■■■■ 28.9
PABPN1Q86U42 CTDSP1-206ENST00000464255 926 ntTSL 526.93■■□□□ 1.96e-15■■■■■ 28.9
PABPN1Q86U42 NIT1-211ENST00000485594 1037 ntTSL 526.05■■□□□ 1.768e-8■■■■■ 28.9
PABPN1Q86U42 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.618e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC23.84■■□□□ 1.418e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-205ENST00000435926 3169 ntTSL 523.65■■□□□ 1.388e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.648e-8■■■■■ 28.9
PABPN1Q86U42 ENSA-209ENST00000369016 923 ntTSL 5 BASIC18.54■□□□□ 0.568e-8■■■■■ 28.9
PABPN1Q86U42 PSMC5-203ENST00000578570 1680 ntTSL 238.56■■■■□ 3.764e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC33.57■■■□□ 2.974e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC31.09■■■□□ 2.574e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.834e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC26.38■■□□□ 1.814e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-205ENST00000579147 2586 ntTSL 222.97■■□□□ 1.274e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-221ENST00000585242 1178 ntTSL 519.18■□□□□ 0.664e-7■■■■■ 28.9
PABPN1Q86U42 SPG7-218ENST00000568205 463 ntTSL 229.81■■■□□ 2.361e-11■■■■■ 28.8
PABPN1Q86U42 PIDD1-206ENST00000527812 481 ntTSL 333.41■■■□□ 2.942e-7■■■■■ 28.7
PABPN1Q86U42 MAMDC4-204ENST00000481327 380 ntTSL 343.94■■■■■ 4.629e-7■■■■■ 28.7
Retrieved 100 of 8,254 protein–RNA pairs in 336 ms