RNA–Protein interactions for RNA: ENST00000389900.8

RNF216-201, Transcript of ring finger protein 216, humanhuman

TSL 1 (best)

Gene RNF216, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-201ENST00000389900 NISCHQ9Y2I1 1504 aa17.67■□□□□ 0.42
RNF216-201ENST00000389900 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
RNF216-201ENST00000389900 MYT1Q01538 1121 aa16.87■□□□□ 0.29
RNF216-201ENST00000389900 TTBK1Q5TCY1 1321 aaPredicted RBP16.32■□□□□ 0.2
RNF216-201ENST00000389900 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
RNF216-201ENST00000389900 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
RNF216-201ENST00000389900 ERICH6Q7L0X2 663 aa15.78■□□□□ 0.12
RNF216-201ENST00000389900 APLP2Q06481 763 aa15.7■□□□□ 0.1
RNF216-201ENST00000389900 ABCC9O60706 1549 aa15.46■□□□□ 0.07
RNF216-201ENST00000389900 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
RNF216-201ENST00000389900 CCDC180Q9P1Z9 1646 aa15.36■□□□□ 0.05
RNF216-201ENST00000389900 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
RNF216-201ENST00000389900 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
RNF216-201ENST00000389900 HRCP23327 699 aa15.08■□□□□ 0.01
RNF216-201ENST00000389900 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
RNF216-201ENST00000389900 EIF5BO60841 1220 aaKnown RBP14.9□□□□□ -0.02
RNF216-201ENST00000389900 ZCCHC6Q5VYS8 1495 aaKnown RBP14.86□□□□□ -0.03
RNF216-201ENST00000389900 DCAF8L2P0C7V8 631 aa14.8□□□□□ -0.04
RNF216-201ENST00000389900 CENPBP07199 599 aaPredicted RBP14.74□□□□□ -0.05
RNF216-201ENST00000389900 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.05
RNF216-201ENST00000389900 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
RNF216-201ENST00000389900 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
RNF216-201ENST00000389900 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
RNF216-201ENST00000389900 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
RNF216-201ENST00000389900 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
RNF216-201ENST00000389900 NACADO15069 1562 aa14.53□□□□□ -0.08
RNF216-201ENST00000389900 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.12e-8■■■■■ 29.7
RNF216-201ENST00000389900 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
RNF216-201ENST00000389900 ANP32EQ9BTT0 268 aa14.37□□□□□ -0.11
RNF216-201ENST00000389900 MYO15BQ96JP2 1530 aa14.33□□□□□ -0.11
RNF216-201ENST00000389900 UBE2Q2Q8WVN8 375 aa14.33□□□□□ -0.11
RNF216-201ENST00000389900 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
RNF216-201ENST00000389900 PODXL2Q9NZ53 605 aa14.3□□□□□ -0.12
RNF216-201ENST00000389900 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
RNF216-201ENST00000389900 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
RNF216-201ENST00000389900 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
RNF216-201ENST00000389900 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
RNF216-201ENST00000389900 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
RNF216-201ENST00000389900 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
RNF216-201ENST00000389900 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
RNF216-201ENST00000389900 NEUROD1Q13562 356 aa14.12□□□□□ -0.15
RNF216-201ENST00000389900 PKNOX2Q96KN3 472 aa14.08□□□□□ -0.16
RNF216-201ENST00000389900 RANGAP1P46060 587 aaPredicted RBP14.04□□□□□ -0.16
RNF216-201ENST00000389900 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
RNF216-201ENST00000389900 PCGF6Q9BYE7 350 aa14□□□□□ -0.17
RNF216-201ENST00000389900 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.17
RNF216-201ENST00000389900 CC2D2AQ9P2K1 1620 aa13.96□□□□□ -0.17
RNF216-201ENST00000389900 ARXQ96QS3 562 aa13.95□□□□□ -0.18
RNF216-201ENST00000389900 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
RNF216-201ENST00000389900 CECR2Q9BXF3 1484 aa13.9□□□□□ -0.18
RNF216-201ENST00000389900 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
RNF216-201ENST00000389900 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
RNF216-201ENST00000389900 SALL2Q9Y467 1007 aaPredicted RBP13.84□□□□□ -0.19
RNF216-201ENST00000389900 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
RNF216-201ENST00000389900 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
RNF216-201ENST00000389900 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
RNF216-201ENST00000389900 NEFLP07196 543 aa13.8□□□□□ -0.2
RNF216-201ENST00000389900 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
RNF216-201ENST00000389900 PDIA4P13667 645 aaKnown RBP13.79□□□□□ -0.2
RNF216-201ENST00000389900 PDE4CQ08493 712 aa13.76□□□□□ -0.21
RNF216-201ENST00000389900 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
RNF216-201ENST00000389900 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
RNF216-201ENST00000389900 MROH2BQ7Z745 1585 aa13.66□□□□□ -0.22
RNF216-201ENST00000389900 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
RNF216-201ENST00000389900 ERICH6BQ5W0A0 696 aa13.66□□□□□ -0.22
RNF216-201ENST00000389900 WIZO95785 1651 aa13.58□□□□□ -0.24
RNF216-201ENST00000389900 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
RNF216-201ENST00000389900 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
RNF216-201ENST00000389900 FGD1P98174 961 aa13.53□□□□□ -0.24
RNF216-201ENST00000389900 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
RNF216-201ENST00000389900 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
RNF216-201ENST00000389900 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
RNF216-201ENST00000389900 HOMEZQ8IX15 550 aa13.5□□□□□ -0.25
RNF216-201ENST00000389900 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
RNF216-201ENST00000389900 A0A0U1RQG5 324 aaPredicted RBP13.47□□□□□ -0.25
RNF216-201ENST00000389900 NCAPD3P42695 1498 aa13.44□□□□□ -0.26
RNF216-201ENST00000389900 TAF7LQ5H9L4 462 aa13.44□□□□□ -0.26
RNF216-201ENST00000389900 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
RNF216-201ENST00000389900 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
RNF216-201ENST00000389900 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
RNF216-201ENST00000389900 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
RNF216-201ENST00000389900 DEKP35659 375 aaKnown RBP13.38□□□□□ -0.27
RNF216-201ENST00000389900 LOC105371045A0A1W2PR82 267 aa13.37□□□□□ -0.27
RNF216-201ENST00000389900 GLIPR1L2Q4G1C9 344 aa13.36□□□□□ -0.27
RNF216-201ENST00000389900 DNAJC5Q9H3Z4 198 aa13.36□□□□□ -0.27
RNF216-201ENST00000389900 AAMPQ13685 434 aa13.35□□□□□ -0.27
RNF216-201ENST00000389900 TRIM26Q12899 539 aaPredicted RBP13.33□□□□□ -0.28
RNF216-201ENST00000389900 ZMYND15Q9H091 742 aa13.33□□□□□ -0.28
RNF216-201ENST00000389900 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
RNF216-201ENST00000389900 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
RNF216-201ENST00000389900 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
RNF216-201ENST00000389900 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
RNF216-201ENST00000389900 NESP48681 1621 aa13.31□□□□□ -0.28
RNF216-201ENST00000389900 RBM10P98175 930 aaKnown RBP13.29□□□□□ -0.28
RNF216-201ENST00000389900 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
RNF216-201ENST00000389900 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
RNF216-201ENST00000389900 DHX37Q8IY37 1157 aaKnown RBP13.28□□□□□ -0.28
RNF216-201ENST00000389900 CHMP4AQ9BY43 222 aa13.28□□□□□ -0.28
RNF216-201ENST00000389900 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.28
RNF216-201ENST00000389900 CUX2O14529 1486 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms