Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDPF1Q6NVV7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.66■□□□□ 0.9
CDPF1Q6NVV7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDPF1Q6NVV7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDPF1Q6NVV7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.65■□□□□ 0.9
CDPF1Q6NVV7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDPF1Q6NVV7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDPF1Q6NVV7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDPF1Q6NVV7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDPF1Q6NVV7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CDPF1Q6NVV7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDPF1Q6NVV7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDPF1Q6NVV7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDPF1Q6NVV7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDPF1Q6NVV7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDPF1Q6NVV7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.61■□□□□ 0.89
CDPF1Q6NVV7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDPF1Q6NVV7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.6■□□□□ 0.89
CDPF1Q6NVV7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDPF1Q6NVV7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDPF1Q6NVV7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDPF1Q6NVV7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDPF1Q6NVV7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDPF1Q6NVV7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDPF1Q6NVV7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDPF1Q6NVV7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDPF1Q6NVV7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDPF1Q6NVV7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDPF1Q6NVV7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDPF1Q6NVV7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDPF1Q6NVV7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CDPF1Q6NVV7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDPF1Q6NVV7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
CDPF1Q6NVV7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDPF1Q6NVV7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDPF1Q6NVV7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDPF1Q6NVV7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.55■□□□□ 0.88
CDPF1Q6NVV7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDPF1Q6NVV7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDPF1Q6NVV7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDPF1Q6NVV7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.53■□□□□ 0.88
CDPF1Q6NVV7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDPF1Q6NVV7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDPF1Q6NVV7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDPF1Q6NVV7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDPF1Q6NVV7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDPF1Q6NVV7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.49■□□□□ 0.87
CDPF1Q6NVV7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDPF1Q6NVV7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDPF1Q6NVV7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDPF1Q6NVV7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDPF1Q6NVV7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.48■□□□□ 0.87
CDPF1Q6NVV7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.48■□□□□ 0.87
CDPF1Q6NVV7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDPF1Q6NVV7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.47■□□□□ 0.87
CDPF1Q6NVV7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDPF1Q6NVV7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.46■□□□□ 0.87
CDPF1Q6NVV7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.46■□□□□ 0.87
CDPF1Q6NVV7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDPF1Q6NVV7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDPF1Q6NVV7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.45■□□□□ 0.86
CDPF1Q6NVV7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDPF1Q6NVV7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CDPF1Q6NVV7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDPF1Q6NVV7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDPF1Q6NVV7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDPF1Q6NVV7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDPF1Q6NVV7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDPF1Q6NVV7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDPF1Q6NVV7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.42■□□□□ 0.86
CDPF1Q6NVV7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDPF1Q6NVV7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDPF1Q6NVV7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDPF1Q6NVV7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDPF1Q6NVV7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.4■□□□□ 0.86
CDPF1Q6NVV7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDPF1Q6NVV7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDPF1Q6NVV7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDPF1Q6NVV7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDPF1Q6NVV7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDPF1Q6NVV7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDPF1Q6NVV7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDPF1Q6NVV7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDPF1Q6NVV7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDPF1Q6NVV7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDPF1Q6NVV7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDPF1Q6NVV7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDPF1Q6NVV7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDPF1Q6NVV7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.34■□□□□ 0.85
CDPF1Q6NVV7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.34■□□□□ 0.85
CDPF1Q6NVV7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDPF1Q6NVV7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDPF1Q6NVV7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDPF1Q6NVV7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDPF1Q6NVV7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDPF1Q6NVV7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.33■□□□□ 0.84
CDPF1Q6NVV7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDPF1Q6NVV7 AL121749.1-202ENST00000609313 2153 ntBASIC20.32■□□□□ 0.84
CDPF1Q6NVV7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDPF1Q6NVV7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms