Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HIST2H2BCQ6DN03 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HIST2H2BCQ6DN03 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.28■■□□□ 1.48
HIST2H2BCQ6DN03 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.26■■□□□ 1.47
HIST2H2BCQ6DN03 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.24■■□□□ 1.47
HIST2H2BCQ6DN03 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
HIST2H2BCQ6DN03 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.23■■□□□ 1.47
HIST2H2BCQ6DN03 MIR3648-2-201ENST00000581792 180 ntBASIC24.23■■□□□ 1.47
HIST2H2BCQ6DN03 MIR3648-1-201ENST00000615959 180 ntBASIC24.23■■□□□ 1.47
HIST2H2BCQ6DN03 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.23■■□□□ 1.47
HIST2H2BCQ6DN03 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
HIST2H2BCQ6DN03 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HIST2H2BCQ6DN03 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.22■■□□□ 1.47
HIST2H2BCQ6DN03 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.21■■□□□ 1.47
HIST2H2BCQ6DN03 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
HIST2H2BCQ6DN03 AC021231.2-201ENST00000594613 730 ntBASIC24.2■■□□□ 1.46
HIST2H2BCQ6DN03 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HIST2H2BCQ6DN03 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HIST2H2BCQ6DN03 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HIST2H2BCQ6DN03 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HIST2H2BCQ6DN03 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HIST2H2BCQ6DN03 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.14■■□□□ 1.45
HIST2H2BCQ6DN03 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HIST2H2BCQ6DN03 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
HIST2H2BCQ6DN03 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.14■■□□□ 1.45
HIST2H2BCQ6DN03 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HIST2H2BCQ6DN03 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.14■■□□□ 1.45
HIST2H2BCQ6DN03 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.13■■□□□ 1.45
HIST2H2BCQ6DN03 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
HIST2H2BCQ6DN03 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
HIST2H2BCQ6DN03 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.09■■□□□ 1.45
HIST2H2BCQ6DN03 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.09■■□□□ 1.45
HIST2H2BCQ6DN03 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.08■■□□□ 1.45
HIST2H2BCQ6DN03 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.07■■□□□ 1.44
HIST2H2BCQ6DN03 CR559946.2-201ENST00000623684 991 ntBASIC24.07■■□□□ 1.44
HIST2H2BCQ6DN03 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
HIST2H2BCQ6DN03 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.06■■□□□ 1.44
HIST2H2BCQ6DN03 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
HIST2H2BCQ6DN03 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.05■■□□□ 1.44
HIST2H2BCQ6DN03 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.04■■□□□ 1.44
HIST2H2BCQ6DN03 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.04■■□□□ 1.44
HIST2H2BCQ6DN03 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HIST2H2BCQ6DN03 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HIST2H2BCQ6DN03 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.02■■□□□ 1.44
HIST2H2BCQ6DN03 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
HIST2H2BCQ6DN03 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
HIST2H2BCQ6DN03 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24■■□□□ 1.43
HIST2H2BCQ6DN03 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
HIST2H2BCQ6DN03 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24■■□□□ 1.43
HIST2H2BCQ6DN03 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
HIST2H2BCQ6DN03 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.98■■□□□ 1.43
HIST2H2BCQ6DN03 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
HIST2H2BCQ6DN03 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HIST2H2BCQ6DN03 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HIST2H2BCQ6DN03 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HIST2H2BCQ6DN03 DUX4L11-201ENST00000611504 1267 ntBASIC23.97■■□□□ 1.43
HIST2H2BCQ6DN03 DUX4L12-201ENST00000614593 1267 ntBASIC23.97■■□□□ 1.43
HIST2H2BCQ6DN03 DUX4L14-201ENST00000621227 1267 ntBASIC23.97■■□□□ 1.43
HIST2H2BCQ6DN03 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HIST2H2BCQ6DN03 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.95■■□□□ 1.42
HIST2H2BCQ6DN03 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HIST2H2BCQ6DN03 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HIST2H2BCQ6DN03 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HIST2H2BCQ6DN03 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HIST2H2BCQ6DN03 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.93■■□□□ 1.42
HIST2H2BCQ6DN03 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
HIST2H2BCQ6DN03 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HIST2H2BCQ6DN03 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.91■■□□□ 1.42
HIST2H2BCQ6DN03 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
HIST2H2BCQ6DN03 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
HIST2H2BCQ6DN03 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.9■■□□□ 1.42
HIST2H2BCQ6DN03 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.89■■□□□ 1.42
HIST2H2BCQ6DN03 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
HIST2H2BCQ6DN03 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HIST2H2BCQ6DN03 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.87■■□□□ 1.41
HIST2H2BCQ6DN03 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.86■■□□□ 1.41
HIST2H2BCQ6DN03 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.85■■□□□ 1.41
HIST2H2BCQ6DN03 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.85■■□□□ 1.41
HIST2H2BCQ6DN03 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
HIST2H2BCQ6DN03 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HIST2H2BCQ6DN03 RARRES2P2-201ENST00000394842 485 ntBASIC23.84■■□□□ 1.41
HIST2H2BCQ6DN03 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.84■■□□□ 1.41
HIST2H2BCQ6DN03 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HIST2H2BCQ6DN03 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HIST2H2BCQ6DN03 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HIST2H2BCQ6DN03 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HIST2H2BCQ6DN03 ABHD17AP5-201ENST00000580133 923 ntBASIC23.82■■□□□ 1.4
HIST2H2BCQ6DN03 MIR6090-201ENST00000622481 60 ntBASIC23.82■■□□□ 1.4
HIST2H2BCQ6DN03 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HIST2H2BCQ6DN03 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIST2H2BCQ6DN03 LINC01971-201ENST00000617888 1048 ntBASIC23.81■■□□□ 1.4
HIST2H2BCQ6DN03 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HIST2H2BCQ6DN03 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HIST2H2BCQ6DN03 WASH5P-204ENST00000632292 975 ntBASIC23.78■■□□□ 1.4
HIST2H2BCQ6DN03 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.78■■□□□ 1.4
HIST2H2BCQ6DN03 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HIST2H2BCQ6DN03 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HIST2H2BCQ6DN03 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HIST2H2BCQ6DN03 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.76■■□□□ 1.39
HIST2H2BCQ6DN03 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms