Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01554Q52M75 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01554Q52M75 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01554Q52M75 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01554Q52M75 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01554Q52M75 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01554Q52M75 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01554Q52M75 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01554Q52M75 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01554Q52M75 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01554Q52M75 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01554Q52M75 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01554Q52M75 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01554Q52M75 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01554Q52M75 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01554Q52M75 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01554Q52M75 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01554Q52M75 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01554Q52M75 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01554Q52M75 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01554Q52M75 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01554Q52M75 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01554Q52M75 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01554Q52M75 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LINC01554Q52M75 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01554Q52M75 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01554Q52M75 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01554Q52M75 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01554Q52M75 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01554Q52M75 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC01554Q52M75 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC01554Q52M75 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01554Q52M75 SHF-206ENST00000560471 2499 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01554Q52M75 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01554Q52M75 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01554Q52M75 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01554Q52M75 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LINC01554Q52M75 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC01554Q52M75 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01554Q52M75 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
LINC01554Q52M75 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01554Q52M75 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01554Q52M75 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01554Q52M75 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01554Q52M75 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01554Q52M75 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01554Q52M75 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01554Q52M75 PKM-204ENST00000449901 2526 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01554Q52M75 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01554Q52M75 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01554Q52M75 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01554Q52M75 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01554Q52M75 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01554Q52M75 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01554Q52M75 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01554Q52M75 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01554Q52M75 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01554Q52M75 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01554Q52M75 LTK-203ENST00000453182 2412 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01554Q52M75 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01554Q52M75 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01554Q52M75 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC13.41□□□□□ -0.26
LINC01554Q52M75 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01554Q52M75 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01554Q52M75 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01554Q52M75 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01554Q52M75 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01554Q52M75 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC01554Q52M75 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC01554Q52M75 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01554Q52M75 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01554Q52M75 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01554Q52M75 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC01554Q52M75 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01554Q52M75 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01554Q52M75 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01554Q52M75 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC01554Q52M75 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01554Q52M75 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC01554Q52M75 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01554Q52M75 ILK-212ENST00000532063 1617 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC01554Q52M75 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01554Q52M75 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LINC01554Q52M75 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC01554Q52M75 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01554Q52M75 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01554Q52M75 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC01554Q52M75 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01554Q52M75 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01554Q52M75 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01554Q52M75 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01554Q52M75 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01554Q52M75 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01554Q52M75 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC01554Q52M75 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LINC01554Q52M75 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01554Q52M75 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01554Q52M75 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
LINC01554Q52M75 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01554Q52M75 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms