Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 PGC1YPL206C 966 nt10.81□□□□□ -0.68
VPS13Q07878 HEM12YDR047W 1089 nt10.8□□□□□ -0.68
VPS13Q07878 PEX2YJL210W 816 nt10.8□□□□□ -0.68
VPS13Q07878 LOT5YKL183W 921 nt10.8□□□□□ -0.68
VPS13Q07878 CLB6YGR109C 1143 nt10.78□□□□□ -0.68
VPS13Q07878 YBR232CYBR232C 360 nt10.78□□□□□ -0.68
VPS13Q07878 STP3YLR375W 1032 nt10.74□□□□□ -0.69
VPS13Q07878 YER152W-AYER152W-A 567 nt10.73□□□□□ -0.69
VPS13Q07878 SOD2YHR008C 702 nt10.73□□□□□ -0.69
VPS13Q07878 GND1YHR183W 1470 nt10.72□□□□□ -0.69
VPS13Q07878 GDH3YAL062W 1374 nt10.71□□□□□ -0.69
VPS13Q07878 TIP1YBR067C 633 nt10.71□□□□□ -0.69
VPS13Q07878 ALD4YOR374W 1560 nt10.7□□□□□ -0.7
VPS13Q07878 PAU19YMR325W 375 nt10.7□□□□□ -0.7
VPS13Q07878 NRT1YOR071C 1797 nt10.7□□□□□ -0.7
VPS13Q07878 AGP1YCL025C 1902 nt10.69□□□□□ -0.7
VPS13Q07878 BNA2YJR078W 1362 nt10.69□□□□□ -0.7
VPS13Q07878 YGR201CYGR201C 678 nt10.69□□□□□ -0.7
VPS13Q07878 YPI1YFR003C 468 nt10.68□□□□□ -0.7
VPS13Q07878 YCR102CYCR102C 1107 nt10.67□□□□□ -0.7
VPS13Q07878 APT2YDR441C 546 nt10.67□□□□□ -0.7
VPS13Q07878 SHH4YLR164W 507 nt10.66□□□□□ -0.7
VPS13Q07878 TOM6YOR045W 186 nt10.65□□□□□ -0.7
VPS13Q07878 UTH1YKR042W 1098 nt10.64□□□□□ -0.71
VPS13Q07878 YPL222C-AYPL222C-A 246 nt10.63□□□□□ -0.71
VPS13Q07878 YIA6YIL006W 1122 nt10.6□□□□□ -0.71
VPS13Q07878 AVT6YER119C 1347 nt10.57□□□□□ -0.72
VPS13Q07878 SMM1YNR015W 1155 nt10.53□□□□□ -0.72
VPS13Q07878 PIB2YGL023C 1908 nt10.53□□□□□ -0.72
VPS13Q07878 BDF1YLR399C 2061 nt10.48□□□□□ -0.73
VPS13Q07878 TIR3YIL011W 810 nt10.47□□□□□ -0.73
VPS13Q07878 MIC12YBR262C 321 nt10.47□□□□□ -0.73
VPS13Q07878 MET28YIR017C 564 nt10.46□□□□□ -0.73
VPS13Q07878 TIF6YPR016C 738 nt10.45□□□□□ -0.74
VPS13Q07878 DUT1YBR252W 444 nt10.45□□□□□ -0.74
VPS13Q07878 YHR056W-AYHR056W-A 435 nt10.44□□□□□ -0.74
VPS13Q07878 FCY21YER060W 1587 nt10.44□□□□□ -0.74
VPS13Q07878 POM34YLR018C 900 nt10.44□□□□□ -0.74
VPS13Q07878 CCT5YJR064W 1689 nt10.43□□□□□ -0.74
VPS13Q07878 KRE1YNL322C 942 nt10.43□□□□□ -0.74
VPS13Q07878 ATG15YCR068W 1563 nt10.42□□□□□ -0.74
VPS13Q07878 YOR268CYOR268C 399 nt10.41□□□□□ -0.74
VPS13Q07878 ZTA1YBR046C 1005 nt10.41□□□□□ -0.74
VPS13Q07878 SAM50YNL026W 1455 nt10.39□□□□□ -0.75
VPS13Q07878 RDN18-1RDN18-1 1800 nt10.39□□□□□ -0.75
VPS13Q07878 RDN18-2RDN18-2 1800 nt10.39□□□□□ -0.75
VPS13Q07878 HHO1YPL127C 777 nt10.38□□□□□ -0.75
VPS13Q07878 MFG1YDL233W 1377 nt10.37□□□□□ -0.75
VPS13Q07878 RPL12BYDR418W 498 nt10.37□□□□□ -0.75
VPS13Q07878 GOR1YNL274C 1053 nt10.36□□□□□ -0.75
VPS13Q07878 PTK1YKL198C 1989 nt10.35□□□□□ -0.75
VPS13Q07878 QDR2YIL121W 1629 nt10.34□□□□□ -0.75
VPS13Q07878 YML089CYML089C 369 nt10.33□□□□□ -0.76
VPS13Q07878 APS2YJR058C 444 nt10.32□□□□□ -0.76
VPS13Q07878 YMR206WYMR206W 942 nt10.31□□□□□ -0.76
VPS13Q07878 VRG4YGL225W 1014 nt10.3□□□□□ -0.76
VPS13Q07878 YJL055WYJL055W 738 nt10.3□□□□□ -0.76
VPS13Q07878 LSB3YFR024C-A 1380 nt10.29□□□□□ -0.76
VPS13Q07878 HXT12YIL170W 1374 nt10.29□□□□□ -0.76
VPS13Q07878 PRO1YDR300C 1287 nt10.28□□□□□ -0.76
VPS13Q07878 NBP35YGL091C 987 nt10.28□□□□□ -0.76
VPS13Q07878 PRY1YJL079C 900 nt10.28□□□□□ -0.76
VPS13Q07878 TUB4YLR212C 1422 nt10.27□□□□□ -0.77
VPS13Q07878 TAT1YBR069C 1860 nt10.25□□□□□ -0.77
VPS13Q07878 THI72YOR192C 1800 nt10.23□□□□□ -0.77
VPS13Q07878 TOS1YBR162C 1368 nt10.23□□□□□ -0.77
VPS13Q07878 UGA4YDL210W 1716 nt10.22□□□□□ -0.77
VPS13Q07878 YOR343CYOR343C 327 nt10.22□□□□□ -0.77
VPS13Q07878 FIT3YOR383C 615 nt10.22□□□□□ -0.77
VPS13Q07878 MTG2YHR168W 1557 nt10.21□□□□□ -0.77
VPS13Q07878 SEC11YIR022W 504 nt10.21□□□□□ -0.77
VPS13Q07878 ALP1YNL270C 1722 nt10.2□□□□□ -0.78
VPS13Q07878 YCP4YCR004C 744 nt10.2□□□□□ -0.78
VPS13Q07878 LSC2YGR244C 1284 nt10.2□□□□□ -0.78
VPS13Q07878 GAP1YKR039W 1809 nt10.19□□□□□ -0.78
VPS13Q07878 TAF13YML098W 504 nt10.19□□□□□ -0.78
VPS13Q07878 PAR32YDL173W 888 nt10.18□□□□□ -0.78
VPS13Q07878 GSF2YML048W 1212 nt10.18□□□□□ -0.78
VPS13Q07878 KAE1YKR038C 1161 nt10.17□□□□□ -0.78
VPS13Q07878 SNZ1YMR096W 894 nt10.17□□□□□ -0.78
VPS13Q07878 RTF1YGL244W 1677 nt10.16□□□□□ -0.78
VPS13Q07878 GAL3YDR009W 1563 nt10.15□□□□□ -0.79
VPS13Q07878 HOG1YLR113W 1308 nt10.12□□□□□ -0.79
VPS13Q07878 YDR510C-AYDR510C-A 117 nt10.11□□□□□ -0.79
VPS13Q07878 PLB1YMR008C 1995 nt10.11□□□□□ -0.79
VPS13Q07878 RAX1YOR301W 1308 nt10.11□□□□□ -0.79
VPS13Q07878 PAU21YOR394W 495 nt10.11□□□□□ -0.79
VPS13Q07878 PAU22YPL282C 495 nt10.11□□□□□ -0.79
VPS13Q07878 LSB5YCL034W 1065 nt10.11□□□□□ -0.79
VPS13Q07878 GUT2YIL155C 1950 nt10.1□□□□□ -0.79
VPS13Q07878 YPL247CYPL247C 1572 nt10.09□□□□□ -0.79
VPS13Q07878 HSP60YLR259C 1719 nt10.08□□□□□ -0.8
VPS13Q07878 CCA1YER168C 1641 nt10.07□□□□□ -0.8
VPS13Q07878 YCR025CYCR025C 411 nt10.07□□□□□ -0.8
VPS13Q07878 PCH2YBR186W 1695 nt10.04□□□□□ -0.8
VPS13Q07878 AQY2YLL052C 450 nt10.03□□□□□ -0.8
VPS13Q07878 YMR262WYMR262W 942 nt10.02□□□□□ -0.8
VPS13Q07878 POT1YIL160C 1254 nt10.01□□□□□ -0.81
VPS13Q07878 YAL016C-AYAL016C-A 315 nt10□□□□□ -0.81
VPS13Q07878 YFL054CYFL054C 1941 nt10□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms