Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 YGR259CYGR259C 441 nt10.33□□□□□ -0.76
MSH2P25847 NIT1YIL164C 600 nt10.33□□□□□ -0.76
MSH2P25847 SGT2YOR007C 1041 nt10.33□□□□□ -0.76
MSH2P25847 PHO89YBR296C 1725 nt10.3□□□□□ -0.76
MSH2P25847 HSL7YBR133C 2484 nt10.29□□□□□ -0.76
MSH2P25847 RAD51YER095W 1203 nt10.28□□□□□ -0.76
MSH2P25847 YCR102CYCR102C 1107 nt10.24□□□□□ -0.77
MSH2P25847 BSP1YPR171W 1731 nt10.23□□□□□ -0.77
MSH2P25847 SNF1YDR477W 1902 nt10.22□□□□□ -0.77
MSH2P25847 YLR111WYLR111W 333 nt10.2□□□□□ -0.78
MSH2P25847 RTN2YDL204W 1182 nt10.19□□□□□ -0.78
MSH2P25847 MRP20YDR405W 792 nt10.19□□□□□ -0.78
MSH2P25847 CMP2YML057W 1815 nt10.18□□□□□ -0.78
MSH2P25847 NBP35YGL091C 987 nt10.17□□□□□ -0.78
MSH2P25847 IRC24YIR036C 792 nt10.17□□□□□ -0.78
MSH2P25847 COQ2YNR041C 1119 nt10.17□□□□□ -0.78
MSH2P25847 Q0010Q0010 387 nt10.17□□□□□ -0.78
MSH2P25847 BIO5YNR056C 1686 nt10.16□□□□□ -0.78
MSH2P25847 SSN3YPL042C 1668 nt10.15□□□□□ -0.78
MSH2P25847 MET8YBR213W 825 nt10.14□□□□□ -0.79
MSH2P25847 YNR029CYNR029C 1290 nt10.13□□□□□ -0.79
MSH2P25847 PBP1YGR178C 2169 nt10.13□□□□□ -0.79
MSH2P25847 CYT2YKL087C 675 nt10.11□□□□□ -0.79
MSH2P25847 YLR349WYLR349W 507 nt10.11□□□□□ -0.79
MSH2P25847 STE4YOR212W 1272 nt10.11□□□□□ -0.79
MSH2P25847 RDN25-1RDN25-1 3396 nt10.1□□□□□ -0.79
MSH2P25847 RDN25-2RDN25-2 3396 nt10.1□□□□□ -0.79
MSH2P25847 CLB6YGR109C 1143 nt10.08□□□□□ -0.8
MSH2P25847 YJR154WYJR154W 1041 nt10.08□□□□□ -0.8
MSH2P25847 PLB1YMR008C 1995 nt10.07□□□□□ -0.8
MSH2P25847 SFA1YDL168W 1161 nt10.07□□□□□ -0.8
MSH2P25847 RPL4BYDR012W 1089 nt10.07□□□□□ -0.8
MSH2P25847 RAD23YEL037C 1197 nt10.07□□□□□ -0.8
MSH2P25847 RPL4AYBR031W 1089 nt10.07□□□□□ -0.8
MSH2P25847 YLR437C-AYLR437C-A 228 nt10.06□□□□□ -0.8
MSH2P25847 ARP6YLR085C 1317 nt10.06□□□□□ -0.8
MSH2P25847 TIR3YIL011W 810 nt10.05□□□□□ -0.8
MSH2P25847 SHH4YLR164W 507 nt10.04□□□□□ -0.8
MSH2P25847 HEL2YDR266C 1920 nt10.03□□□□□ -0.8
MSH2P25847 RPS14BYJL191W 417 nt10.02□□□□□ -0.81
MSH2P25847 SDH5YOL071W 489 nt10.01□□□□□ -0.81
MSH2P25847 YDR510C-AYDR510C-A 117 nt10□□□□□ -0.81
MSH2P25847 YHL019W-AYHL019W-A 594 nt10□□□□□ -0.81
MSH2P25847 FUN14YAL008W 597 nt10□□□□□ -0.81
MSH2P25847 PRO1YDR300C 1287 nt9.99□□□□□ -0.81
MSH2P25847 ADH7YCR105W 1086 nt9.98□□□□□ -0.81
MSH2P25847 LSC2YGR244C 1284 nt9.97□□□□□ -0.81
MSH2P25847 CAB5YDR196C 726 nt9.96□□□□□ -0.82
MSH2P25847 RIB3YDR487C 627 nt9.95□□□□□ -0.82
MSH2P25847 PRM5YIL117C 957 nt9.95□□□□□ -0.82
MSH2P25847 GAP1YKR039W 1809 nt9.95□□□□□ -0.82
MSH2P25847 ATG15YCR068W 1563 nt9.94□□□□□ -0.82
MSH2P25847 PAU15YIR041W 375 nt9.94□□□□□ -0.82
MSH2P25847 POM34YLR018C 900 nt9.94□□□□□ -0.82
MSH2P25847 TOM6YOR045W 186 nt9.94□□□□□ -0.82
MSH2P25847 UTH1YKR042W 1098 nt9.93□□□□□ -0.82
MSH2P25847 UTR1YJR049C 1593 nt9.92□□□□□ -0.82
MSH2P25847 YJL195CYJL195C 702 nt9.92□□□□□ -0.82
MSH2P25847 TSC10YBR265W 963 nt9.92□□□□□ -0.82
MSH2P25847 YLR279WYLR279W 390 nt9.91□□□□□ -0.82
MSH2P25847 YGR012WYGR012W 1182 nt9.9□□□□□ -0.82
MSH2P25847 YML089CYML089C 369 nt9.89□□□□□ -0.83
MSH2P25847 ALD4YOR374W 1560 nt9.87□□□□□ -0.83
MSH2P25847 SAM35YHR083W 990 nt9.86□□□□□ -0.83
MSH2P25847 PEX2YJL210W 816 nt9.86□□□□□ -0.83
MSH2P25847 HIF1YLL022C 1158 nt9.85□□□□□ -0.83
MSH2P25847 YAT1YAR035W 2064 nt9.84□□□□□ -0.83
MSH2P25847 ADH1YOL086C 1047 nt9.84□□□□□ -0.83
MSH2P25847 ESS1YJR017C 513 nt9.83□□□□□ -0.84
MSH2P25847 HIP1YGR191W 1812 nt9.83□□□□□ -0.84
MSH2P25847 NRT1YOR071C 1797 nt9.8□□□□□ -0.84
MSH2P25847 YEL008WYEL008W 381 nt9.79□□□□□ -0.84
MSH2P25847 YPI1YFR003C 468 nt9.78□□□□□ -0.84
MSH2P25847 TIF6YPR016C 738 nt9.78□□□□□ -0.84
MSH2P25847 CPD1YGR247W 720 nt9.77□□□□□ -0.85
MSH2P25847 DIF1YLR437C 402 nt9.77□□□□□ -0.85
MSH2P25847 GPN2YOR262W 1044 nt9.76□□□□□ -0.85
MSH2P25847 MET28YIR017C 564 nt9.74□□□□□ -0.85
MSH2P25847 MAS1YLR163C 1389 nt9.74□□□□□ -0.85
MSH2P25847 tS(GCU)LtS(GCU)L 80 nt9.73□□□□□ -0.85
MSH2P25847 YPL222C-AYPL222C-A 246 nt9.73□□□□□ -0.85
MSH2P25847 MCM5YLR274W 2328 nt9.72□□□□□ -0.85
MSH2P25847 MSB4YOL112W 1479 nt9.72□□□□□ -0.85
MSH2P25847 YGR139WYGR139W 339 nt9.71□□□□□ -0.86
MSH2P25847 SFP1YLR403W 2052 nt9.71□□□□□ -0.86
MSH2P25847 MET2YNL277W 1461 nt9.7□□□□□ -0.86
MSH2P25847 RSC4YKR008W 1878 nt9.69□□□□□ -0.86
MSH2P25847 NAP1YKR048C 1254 nt9.69□□□□□ -0.86
MSH2P25847 SPT20YOL148C 1815 nt9.68□□□□□ -0.86
MSH2P25847 YAR028WYAR028W 705 nt9.68□□□□□ -0.86
MSH2P25847 PUP1YOR157C 786 nt9.68□□□□□ -0.86
MSH2P25847 FIT3YOR383C 615 nt9.68□□□□□ -0.86
MSH2P25847 HXT1YHR094C 1713 nt9.68□□□□□ -0.86
MSH2P25847 RIM8YGL045W 1629 nt9.67□□□□□ -0.86
MSH2P25847 PAB1YER165W 1734 nt9.66□□□□□ -0.86
MSH2P25847 GND1YHR183W 1470 nt9.66□□□□□ -0.86
MSH2P25847 SEN2YLR105C 1134 nt9.65□□□□□ -0.86
MSH2P25847 LOT5YKL183W 921 nt9.64□□□□□ -0.87
MSH2P25847 AKR2YOR034C 2250 nt9.63□□□□□ -0.87
MSH2P25847 MAE1YKL029C 2010 nt9.63□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 39.8 ms