Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
TPM3P06753 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.39■■■□□ 2.46
TPM3P06753 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TPM3P06753 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TPM3P06753 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TPM3P06753 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.34■■■□□ 2.45
TPM3P06753 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.33■■■□□ 2.45
TPM3P06753 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TPM3P06753 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.32■■■□□ 2.44
TPM3P06753 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TPM3P06753 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.29■■■□□ 2.44
TPM3P06753 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TPM3P06753 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
TPM3P06753 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.28■■■□□ 2.44
TPM3P06753 AC139426.1-201ENST00000568218 2529 ntBASIC30.28■■■□□ 2.44
TPM3P06753 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.26■■■□□ 2.44
TPM3P06753 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.26■■■□□ 2.43
TPM3P06753 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TPM3P06753 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC30.25■■■□□ 2.43
TPM3P06753 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TPM3P06753 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TPM3P06753 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
TPM3P06753 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TPM3P06753 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
TPM3P06753 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TPM3P06753 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TPM3P06753 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
TPM3P06753 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
TPM3P06753 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
TPM3P06753 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
TPM3P06753 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
TPM3P06753 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TPM3P06753 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
TPM3P06753 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
TPM3P06753 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
TPM3P06753 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.42
TPM3P06753 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
TPM3P06753 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
TPM3P06753 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TPM3P06753 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TPM3P06753 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
TPM3P06753 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.09■■■□□ 2.41
TPM3P06753 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.07■■■□□ 2.41
TPM3P06753 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TPM3P06753 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TPM3P06753 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TPM3P06753 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
TPM3P06753 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
TPM3P06753 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
TPM3P06753 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TPM3P06753 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TPM3P06753 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TPM3P06753 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.02■■■□□ 2.4
TPM3P06753 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
TPM3P06753 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
TPM3P06753 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.01■■■□□ 2.4
TPM3P06753 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TPM3P06753 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.01■■■□□ 2.39
TPM3P06753 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TPM3P06753 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TPM3P06753 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TPM3P06753 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
TPM3P06753 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TPM3P06753 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TPM3P06753 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.94■■■□□ 2.38
TPM3P06753 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TPM3P06753 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
TPM3P06753 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TPM3P06753 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.93■■■□□ 2.38
TPM3P06753 AC006077.2-201ENST00000623591 457 ntBASIC29.92■■■□□ 2.38
TPM3P06753 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TPM3P06753 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
TPM3P06753 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TPM3P06753 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
TPM3P06753 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
TPM3P06753 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
TPM3P06753 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
TPM3P06753 ST7-AS1-201ENST00000456775 1889 ntBASIC29.88■■■□□ 2.37
TPM3P06753 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TPM3P06753 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TPM3P06753 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.87■■■□□ 2.37
TPM3P06753 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.87■■■□□ 2.37
TPM3P06753 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.86■■■□□ 2.37
TPM3P06753 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
TPM3P06753 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
TPM3P06753 AC142086.6-201ENST00000621154 1765 ntBASIC29.84■■■□□ 2.37
TPM3P06753 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.84■■■□□ 2.37
TPM3P06753 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TPM3P06753 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.83■■■□□ 2.37
TPM3P06753 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.82■■■□□ 2.36
TPM3P06753 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
TPM3P06753 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.81■■■□□ 2.36
TPM3P06753 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
TPM3P06753 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.8■■■□□ 2.36
TPM3P06753 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
TPM3P06753 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.8■■■□□ 2.36
TPM3P06753 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TPM3P06753 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.79■■■□□ 2.36
TPM3P06753 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TPM3P06753 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms