Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHGA12O60330 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHGA12O60330 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHGA12O60330 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHGA12O60330 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.97■■□□□ 1.91
PCDHGA12O60330 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
PCDHGA12O60330 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.96■■□□□ 1.91
PCDHGA12O60330 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
PCDHGA12O60330 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA12O60330 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.93■■□□□ 1.9
PCDHGA12O60330 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
PCDHGA12O60330 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHGA12O60330 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
PCDHGA12O60330 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
PCDHGA12O60330 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHGA12O60330 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHGA12O60330 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDHGA12O60330 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.9■■□□□ 1.9
PCDHGA12O60330 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGA12O60330 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.88■■□□□ 1.89
PCDHGA12O60330 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA12O60330 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.86■■□□□ 1.89
PCDHGA12O60330 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.86■■□□□ 1.89
PCDHGA12O60330 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.86■■□□□ 1.89
PCDHGA12O60330 WASH5P-204ENST00000632292 975 ntBASIC26.86■■□□□ 1.89
PCDHGA12O60330 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHGA12O60330 HLA-V-202ENST00000446817 847 ntBASIC26.84■■□□□ 1.89
PCDHGA12O60330 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.84■■□□□ 1.89
PCDHGA12O60330 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.84■■□□□ 1.89
PCDHGA12O60330 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDHGA12O60330 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDHGA12O60330 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGA12O60330 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
PCDHGA12O60330 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHGA12O60330 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHGA12O60330 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA12O60330 ZNRF2P2-203ENST00000454624 420 ntBASIC26.81■■□□□ 1.88
PCDHGA12O60330 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDHGA12O60330 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGA12O60330 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHGA12O60330 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGA12O60330 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGA12O60330 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGA12O60330 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGA12O60330 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHGA12O60330 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
PCDHGA12O60330 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHGA12O60330 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHGA12O60330 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGA12O60330 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGA12O60330 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGA12O60330 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHGA12O60330 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHGA12O60330 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.72■■□□□ 1.87
PCDHGA12O60330 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHGA12O60330 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.71■■□□□ 1.87
PCDHGA12O60330 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHGA12O60330 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGA12O60330 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.69■■□□□ 1.86
PCDHGA12O60330 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGA12O60330 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDHGA12O60330 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHGA12O60330 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGA12O60330 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGA12O60330 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGA12O60330 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA12O60330 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA12O60330 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.65■■□□□ 1.86
PCDHGA12O60330 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.65■■□□□ 1.86
PCDHGA12O60330 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.65■■□□□ 1.86
PCDHGA12O60330 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.64■■□□□ 1.86
PCDHGA12O60330 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.63■■□□□ 1.85
PCDHGA12O60330 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.63■■□□□ 1.85
PCDHGA12O60330 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA12O60330 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA12O60330 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHGA12O60330 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGA12O60330 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGA12O60330 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHGA12O60330 DUX4L29-201ENST00000425409 679 ntBASIC26.61■■□□□ 1.85
PCDHGA12O60330 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA12O60330 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
PCDHGA12O60330 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
PCDHGA12O60330 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGA12O60330 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.58■■□□□ 1.85
PCDHGA12O60330 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
PCDHGA12O60330 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGA12O60330 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGA12O60330 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA12O60330 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGA12O60330 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGA12O60330 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGA12O60330 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA12O60330 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA12O60330 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA12O60330 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA12O60330 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA12O60330 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGA12O60330 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGA12O60330 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms