Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFA4O00483 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDUFA4O00483 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.83■□□□□ 0.92
NDUFA4O00483 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFA4O00483 SETD8P1-201ENST00000623146 1180 ntBASIC20.8■□□□□ 0.92
NDUFA4O00483 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NDUFA4O00483 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NDUFA4O00483 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NDUFA4O00483 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NDUFA4O00483 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.78■□□□□ 0.92
NDUFA4O00483 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
NDUFA4O00483 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
NDUFA4O00483 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NDUFA4O00483 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA4O00483 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA4O00483 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA4O00483 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA4O00483 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA4O00483 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
NDUFA4O00483 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA4O00483 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA4O00483 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NDUFA4O00483 WASH5P-204ENST00000632292 975 ntBASIC20.75■□□□□ 0.91
NDUFA4O00483 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA4O00483 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
NDUFA4O00483 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.73■□□□□ 0.91
NDUFA4O00483 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFA4O00483 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDUFA4O00483 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA4O00483 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFA4O00483 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA4O00483 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA4O00483 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NDUFA4O00483 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFA4O00483 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA4O00483 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA4O00483 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA4O00483 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA4O00483 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFA4O00483 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFA4O00483 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA4O00483 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.65■□□□□ 0.9
NDUFA4O00483 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.65■□□□□ 0.9
NDUFA4O00483 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.65■□□□□ 0.9
NDUFA4O00483 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFA4O00483 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.64■□□□□ 0.9
NDUFA4O00483 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NDUFA4O00483 AL161658.1-201ENST00000623641 1967 ntBASIC20.63■□□□□ 0.89
NDUFA4O00483 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA4O00483 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
NDUFA4O00483 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFA4O00483 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.63■□□□□ 0.89
NDUFA4O00483 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NDUFA4O00483 AC097358.2-201ENST00000607541 1159 ntBASIC20.62■□□□□ 0.89
NDUFA4O00483 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFA4O00483 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NDUFA4O00483 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFA4O00483 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFA4O00483 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFA4O00483 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NDUFA4O00483 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.59■□□□□ 0.89
NDUFA4O00483 AC136428.2-201ENST00000563187 214 ntBASIC20.58■□□□□ 0.89
NDUFA4O00483 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
NDUFA4O00483 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.58■□□□□ 0.88
NDUFA4O00483 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NDUFA4O00483 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NDUFA4O00483 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFA4O00483 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFA4O00483 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFA4O00483 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.57■□□□□ 0.88
NDUFA4O00483 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFA4O00483 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFA4O00483 AL391121.1-201ENST00000607967 1349 ntBASIC20.55■□□□□ 0.88
NDUFA4O00483 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFA4O00483 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFA4O00483 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NDUFA4O00483 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFA4O00483 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.54■□□□□ 0.88
NDUFA4O00483 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFA4O00483 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFA4O00483 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NDUFA4O00483 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFA4O00483 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFA4O00483 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFA4O00483 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.52■□□□□ 0.88
NDUFA4O00483 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA4O00483 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NDUFA4O00483 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA4O00483 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.51■□□□□ 0.87
NDUFA4O00483 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA4O00483 CAHM-201ENST00000604200 896 ntBASIC20.51■□□□□ 0.87
NDUFA4O00483 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA4O00483 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA4O00483 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.5■□□□□ 0.87
NDUFA4O00483 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.5■□□□□ 0.87
NDUFA4O00483 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFA4O00483 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.48■□□□□ 0.87
NDUFA4O00483 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFA4O00483 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NDUFA4O00483 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms