Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV22A0A0B4J277 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV22A0A0B4J277 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV22A0A0B4J277 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV22A0A0B4J277 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV22A0A0B4J277 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV22A0A0B4J277 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV22A0A0B4J277 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV22A0A0B4J277 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV22A0A0B4J277 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV22A0A0B4J277 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV22A0A0B4J277 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV22A0A0B4J277 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV22A0A0B4J277 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV22A0A0B4J277 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV22A0A0B4J277 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV22A0A0B4J277 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV22A0A0B4J277 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV22A0A0B4J277 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV22A0A0B4J277 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
TRAV22A0A0B4J277 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV22A0A0B4J277 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV22A0A0B4J277 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV22A0A0B4J277 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV22A0A0B4J277 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV22A0A0B4J277 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV22A0A0B4J277 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV22A0A0B4J277 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV22A0A0B4J277 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV22A0A0B4J277 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV22A0A0B4J277 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TRAV22A0A0B4J277 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV22A0A0B4J277 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV22A0A0B4J277 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV22A0A0B4J277 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV22A0A0B4J277 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV22A0A0B4J277 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV22A0A0B4J277 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV22A0A0B4J277 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV22A0A0B4J277 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV22A0A0B4J277 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV22A0A0B4J277 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV22A0A0B4J277 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV22A0A0B4J277 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV22A0A0B4J277 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV22A0A0B4J277 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV22A0A0B4J277 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV22A0A0B4J277 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV22A0A0B4J277 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV22A0A0B4J277 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV22A0A0B4J277 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV22A0A0B4J277 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV22A0A0B4J277 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV22A0A0B4J277 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV22A0A0B4J277 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV22A0A0B4J277 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV22A0A0B4J277 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV22A0A0B4J277 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV22A0A0B4J277 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV22A0A0B4J277 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV22A0A0B4J277 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV22A0A0B4J277 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV22A0A0B4J277 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV22A0A0B4J277 CREM-210ENST00000374721 2020 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV22A0A0B4J277 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV22A0A0B4J277 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV22A0A0B4J277 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV22A0A0B4J277 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV22A0A0B4J277 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV22A0A0B4J277 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV22A0A0B4J277 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV22A0A0B4J277 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV22A0A0B4J277 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV22A0A0B4J277 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV22A0A0B4J277 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TRAV22A0A0B4J277 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV22A0A0B4J277 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV22A0A0B4J277 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV22A0A0B4J277 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV22A0A0B4J277 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV22A0A0B4J277 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV22A0A0B4J277 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV22A0A0B4J277 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
TRAV22A0A0B4J277 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV22A0A0B4J277 SHF-207ENST00000560540 2062 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV22A0A0B4J277 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV22A0A0B4J277 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV22A0A0B4J277 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV22A0A0B4J277 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV22A0A0B4J277 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms