Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV6A0A075B6T7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV6A0A075B6T7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV6A0A075B6T7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRAV6A0A075B6T7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.34■■□□□ 1.33
TRAV6A0A075B6T7 AC120057.4-201ENST00000624722 1615 ntBASIC23.33■■□□□ 1.33
TRAV6A0A075B6T7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TRAV6A0A075B6T7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
TRAV6A0A075B6T7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRAV6A0A075B6T7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAV6A0A075B6T7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV6A0A075B6T7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV6A0A075B6T7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV6A0A075B6T7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV6A0A075B6T7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRAV6A0A075B6T7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TRAV6A0A075B6T7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAV6A0A075B6T7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRAV6A0A075B6T7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRAV6A0A075B6T7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRAV6A0A075B6T7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRAV6A0A075B6T7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
TRAV6A0A075B6T7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRAV6A0A075B6T7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.22■■□□□ 1.31
TRAV6A0A075B6T7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRAV6A0A075B6T7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRAV6A0A075B6T7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRAV6A0A075B6T7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRAV6A0A075B6T7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRAV6A0A075B6T7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRAV6A0A075B6T7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAV6A0A075B6T7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TRAV6A0A075B6T7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
TRAV6A0A075B6T7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV6A0A075B6T7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV6A0A075B6T7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV6A0A075B6T7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.18■■□□□ 1.3
TRAV6A0A075B6T7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC23.17■■□□□ 1.3
TRAV6A0A075B6T7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.17■■□□□ 1.3
TRAV6A0A075B6T7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV6A0A075B6T7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TRAV6A0A075B6T7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
TRAV6A0A075B6T7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.14■■□□□ 1.29
TRAV6A0A075B6T7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRAV6A0A075B6T7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TRAV6A0A075B6T7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
TRAV6A0A075B6T7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRAV6A0A075B6T7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRAV6A0A075B6T7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV6A0A075B6T7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC23.09■■□□□ 1.29
TRAV6A0A075B6T7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.09■■□□□ 1.29
TRAV6A0A075B6T7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRAV6A0A075B6T7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
TRAV6A0A075B6T7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.07■■□□□ 1.28
TRAV6A0A075B6T7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAV6A0A075B6T7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.07■■□□□ 1.28
TRAV6A0A075B6T7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC23.07■■□□□ 1.28
TRAV6A0A075B6T7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAV6A0A075B6T7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAV6A0A075B6T7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.05■■□□□ 1.28
TRAV6A0A075B6T7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAV6A0A075B6T7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV6A0A075B6T7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV6A0A075B6T7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV6A0A075B6T7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV6A0A075B6T7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRAV6A0A075B6T7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAV6A0A075B6T7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.02■■□□□ 1.28
TRAV6A0A075B6T7 AC135731.1-201ENST00000569415 2548 ntBASIC23.02■■□□□ 1.27
TRAV6A0A075B6T7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAV6A0A075B6T7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.01■■□□□ 1.27
TRAV6A0A075B6T7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAV6A0A075B6T7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRAV6A0A075B6T7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAV6A0A075B6T7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAV6A0A075B6T7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAV6A0A075B6T7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRAV6A0A075B6T7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRAV6A0A075B6T7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRAV6A0A075B6T7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAV6A0A075B6T7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRAV6A0A075B6T7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAV6A0A075B6T7 AC142086.6-201ENST00000621154 1765 ntBASIC22.98■■□□□ 1.27
TRAV6A0A075B6T7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRAV6A0A075B6T7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.98■■□□□ 1.27
TRAV6A0A075B6T7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.97■■□□□ 1.27
TRAV6A0A075B6T7 ST7-AS1-201ENST00000456775 1889 ntBASIC22.97■■□□□ 1.27
TRAV6A0A075B6T7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TRAV6A0A075B6T7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAV6A0A075B6T7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.96■■□□□ 1.27
TRAV6A0A075B6T7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TRAV6A0A075B6T7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRAV6A0A075B6T7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRAV6A0A075B6T7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAV6A0A075B6T7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TRAV6A0A075B6T7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAV6A0A075B6T7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.93■■□□□ 1.26
TRAV6A0A075B6T7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV6A0A075B6T7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV6A0A075B6T7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms