Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 CLEC17A-203ENST00000547437 2065 ntTSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 DNM1P41-201ENST00000623634 3350 ntBASIC12.8□□□□□ -0.36
MTHFRP42898 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
MTHFRP42898 GEMIN8-202ENST00000380523 1682 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
MTHFRP42898 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MTHFRP42898 SLC4A5-202ENST00000358683 3142 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 CLEC4F-202ENST00000426626 2012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
MTHFRP42898 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 CDC20B-201ENST00000296733 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.79□□□□□ -0.36
MTHFRP42898 ASB11-203ENST00000480796 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 MLN-201ENST00000266003 527 ntTSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC12.79□□□□□ -0.36
MTHFRP42898 AKR1E2-202ENST00000334019 1036 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 AL356488.1-201ENST00000429752 609 ntBASIC12.79□□□□□ -0.36
MTHFRP42898 LINC00158-203ENST00000440205 740 ntTSL 3 BASIC12.79□□□□□ -0.36
MTHFRP42898 POLR2H-205ENST00000443489 807 ntTSL 2 BASIC12.79□□□□□ -0.36
MTHFRP42898 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 KRT42P-203ENST00000458343 671 ntBASIC12.79□□□□□ -0.36
MTHFRP42898 RAB5C-204ENST00000547517 1167 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 KRT128P-201ENST00000550729 663 ntBASIC12.79□□□□□ -0.36
MTHFRP42898 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC12.79□□□□□ -0.36
MTHFRP42898 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 AC147067.2-201ENST00000608161 289 ntBASIC12.79□□□□□ -0.36
MTHFRP42898 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC12.79□□□□□ -0.36
MTHFRP42898 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 AC093323.2-201ENST00000632154 976 ntBASIC12.79□□□□□ -0.36
MTHFRP42898 LINC01702-203ENST00000635350 745 ntTSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC12.79□□□□□ -0.36
MTHFRP42898 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.79□□□□□ -0.36
MTHFRP42898 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
MTHFRP42898 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MTHFRP42898 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MTHFRP42898 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
MTHFRP42898 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
MTHFRP42898 AL354861.3-201ENST00000600140 2412 ntBASIC12.79□□□□□ -0.36
MTHFRP42898 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 TCTN3-204ENST00000430368 1778 ntTSL 2 BASIC12.79□□□□□ -0.36
MTHFRP42898 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
MTHFRP42898 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.79□□□□□ -0.36
MTHFRP42898 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC12.78□□□□□ -0.36
MTHFRP42898 LINC02372-201ENST00000507482 1486 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 AL359510.2-201ENST00000624958 2249 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 MOG-219ENST00000376898 1027 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 PPM1N-204ENST00000401593 548 ntTSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 RPL36AP29-201ENST00000415878 321 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 AC074397.1-201ENST00000418013 1010 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC006987.2-201ENST00000434709 527 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 CR769776.2-201ENST00000445057 378 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 CHCHD3P3-201ENST00000446783 640 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 AL359504.1-201ENST00000448052 493 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 AC072022.2-201ENST00000449623 672 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms