Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC008013.1-201ENST00000612219 629 ntBASIC11.23□□□□□ -0.61
P04436 MEG8_1.1-201ENST00000617245 97 ntBASIC11.23□□□□□ -0.61
P04436 AL035420.3-201ENST00000619647 321 ntBASIC11.23□□□□□ -0.61
P04436 NF1P11-201ENST00000621292 1282 ntBASIC11.23□□□□□ -0.61
P04436 RN7SK-201ENST00000636484 328 ntBASIC11.23□□□□□ -0.61
P04436 AC127526.5-201ENST00000637148 1110 ntBASIC11.23□□□□□ -0.61
P04436 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC11.23□□□□□ -0.61
P04436 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
P04436 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P04436 SDHD-201ENST00000375549 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC11.23□□□□□ -0.61
P04436 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P04436 PAX6-249ENST00000639034 1597 ntTSL 5 BASIC11.23□□□□□ -0.61
P04436 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC11.23□□□□□ -0.61
P04436 LILRA2-202ENST00000251377 1799 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
P04436 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 CTPS2-203ENST00000443824 4319 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
P04436 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.23□□□□□ -0.61
P04436 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 GTF2IP20-203ENST00000634905 2966 ntTSL 5 BASIC11.22□□□□□ -0.61
P04436 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
P04436 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC11.22□□□□□ -0.61
P04436 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
P04436 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 CTTNBP2-201ENST00000160373 5970 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 CD160-201ENST00000235933 1425 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
P04436 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC11.22□□□□□ -0.61
P04436 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC11.22□□□□□ -0.61
P04436 BTNL2-201ENST00000374993 1368 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
P04436 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 UQCC1-209ENST00000397556 1284 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 MIR1226-201ENST00000408658 75 ntBASIC11.22□□□□□ -0.61
P04436 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
P04436 FTLP3-201ENST00000427242 528 ntBASIC11.22□□□□□ -0.61
P04436 PFN1P3-201ENST00000443612 402 ntBASIC11.22□□□□□ -0.61
P04436 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 PFN1P4-201ENST00000450970 402 ntBASIC11.22□□□□□ -0.61
P04436 TMEM159-203ENST00000451578 1378 ntTSL 2 BASIC11.22□□□□□ -0.61
P04436 EEF1GP1-201ENST00000457231 1299 ntBASIC11.22□□□□□ -0.61
P04436 HNRNPA1P24-201ENST00000476029 1046 ntBASIC11.22□□□□□ -0.61
P04436 LINC00923-201ENST00000503768 2036 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.22□□□□□ -0.61
P04436 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
P04436 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC11.22□□□□□ -0.61
P04436 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 AC126614.1-201ENST00000547552 548 ntTSL 4 BASIC11.22□□□□□ -0.61
P04436 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC11.22□□□□□ -0.61
P04436 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC11.22□□□□□ -0.61
P04436 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC11.22□□□□□ -0.61
P04436 ENO1P2-201ENST00000557166 974 ntBASIC11.22□□□□□ -0.61
P04436 AC025580.2-203ENST00000560647 702 ntTSL 3 BASIC11.22□□□□□ -0.61
P04436 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC11.22□□□□□ -0.61
P04436 AC009132.1-201ENST00000565194 320 ntBASIC11.22□□□□□ -0.61
P04436 GSG1L-205ENST00000569166 585 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 RN7SL5P-201ENST00000581458 321 ntBASIC11.22□□□□□ -0.61
P04436 KRT16P3-204ENST00000584759 681 ntTSL 5 BASIC11.22□□□□□ -0.61
P04436 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 AC004233.4-201ENST00000621689 417 ntBASIC11.22□□□□□ -0.61
P04436 EFHC1-219ENST00000636379 1829 ntTSL 5 BASIC11.22□□□□□ -0.61
P04436 AC011591.2-201ENST00000636637 786 ntBASIC11.22□□□□□ -0.61
P04436 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 AL353593.1-201ENST00000602517 3955 ntBASIC11.22□□□□□ -0.61
P04436 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC11.22□□□□□ -0.61
P04436 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.22□□□□□ -0.61
P04436 AC068234.1-201ENST00000560629 2785 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
P04436 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04436 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.21□□□□□ -0.61
P04436 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
P04436 SALL4P1-201ENST00000510352 1860 ntBASIC11.21□□□□□ -0.61
P04436 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms