Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 PIGB-201ENST00000164305 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 HRH2-201ENST00000231683 1080 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 PPP1R2P9-201ENST00000378131 880 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC004884.1-201ENST00000393647 319 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AHCYP3-201ENST00000420053 1279 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 HNRNPA1P9-201ENST00000450624 950 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LINC02051-201ENST00000456535 690 ntTSL 3 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 RN7SL672P-201ENST00000474091 317 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC020917.1-201ENST00000494084 893 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC026412.1-206ENST00000502273 206 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LIN54-206ENST00000506560 2757 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 PKMP4-201ENST00000523134 306 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 ALG10-202ENST00000538927 571 ntTSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC025031.2-201ENST00000550319 627 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 MIR3183-201ENST00000578566 84 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AP003392.6-201ENST00000607709 325 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 U62317.4-201ENST00000609758 448 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC139099.1-202ENST00000574098 2409 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 CRX-202ENST00000539067 2275 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LINC01149-202ENST00000430364 2141 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 TATDN2P2-201ENST00000403590 2226 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 LAMP3-202ENST00000466939 1453 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AC007277.1-201ENST00000428156 2189 ntTSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 CASP7-210ENST00000614447 2555 ntTSL 5 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 SMCR5-201ENST00000543475 2844 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AL357373.1-201ENST00000394974 322 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 MIR874-201ENST00000401190 78 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 MKL1-204ENST00000402630 747 ntTSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 RN7SKP262-201ENST00000411018 283 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AC098657.1-201ENST00000416270 1135 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 TUBB8P9-201ENST00000422534 1276 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AC010240.1-201ENST00000429606 459 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 TUBB8P10-201ENST00000430210 1279 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 C2orf27AP2-201ENST00000438438 555 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AC008021.1-201ENST00000474180 414 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AP005901.1-201ENST00000508721 1181 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 ZNHIT1P1-201ENST00000523947 444 ntBASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 C12orf80-202ENST00000551894 1257 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 INO80E-209ENST00000567254 625 ntTSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PRICKLE4Q2TBC4 AC063977.2-201ENST00000601996 421 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms