Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TMEM106B-202ENST00000396668 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 CICP18-201ENST00000406017 2812 ntBASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 CCDC70-201ENST00000242819 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 RPS6-201ENST00000315377 863 ntTSL 3 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 TRAV38-2DV8-201ENST00000390465 395 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 MAS1LP1-206ENST00000419416 1047 ntBASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AC074389.2-201ENST00000421380 437 ntTSL 3 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 TGIF2P1-201ENST00000435390 685 ntBASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 SNHG14-207ENST00000452731 1064 ntTSL 5 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 LINC00332-201ENST00000455241 834 ntTSL 3 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AC009132.1-201ENST00000565194 320 ntBASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 AL589843.2-202ENST00000602289 740 ntBASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 HIST1H2APS4-202ENST00000635537 681 ntBASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 LRRC2-201ENST00000296144 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 LINC00689-201ENST00000413238 4684 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 MRGPRX2-201ENST00000329773 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 CD1C-201ENST00000368170 1435 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
NPIPA3F8WFD2 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 HINFP-204ENST00000527410 1466 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 MPI-207ENST00000563422 1481 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 LYSMD3-204ENST00000509384 1538 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 PPP1R26P5-201ENST00000416640 3664 ntBASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC092819.1-201ENST00000519981 1690 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC074085.2-201ENST00000416734 428 ntBASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC109779.1-202ENST00000439810 579 ntTSL 4 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC139143.1-201ENST00000441772 1207 ntBASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 RPS19P3-201ENST00000480487 441 ntBASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 SNCA-208ENST00000505199 411 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC114321.1-201ENST00000520075 533 ntTSL 3 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 BIN3-210ENST00000522268 321 ntTSL 5 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC073655.1-201ENST00000550111 493 ntTSL 3 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 MPI-212ENST00000565576 1148 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC127537.3-201ENST00000566532 749 ntBASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 AC007274.3-201ENST00000619838 385 ntBASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 CES1P1-201ENST00000421606 1704 ntBASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms