Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 FBXW4P1-201ENST00000426721 2239 ntBASIC25.86■■□□□ 1.73
DDX49Q9Y6V7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 DUX4L19-201ENST00000557448 1267 ntBASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX49Q9Y6V7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 AC008764.7-201ENST00000593779 1081 ntBASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.84■■□□□ 1.73
DDX49Q9Y6V7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX49Q9Y6V7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.83■■□□□ 1.72
DDX49Q9Y6V7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.83■■□□□ 1.72
DDX49Q9Y6V7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 CA15P2-201ENST00000611168 834 ntBASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 SLC25A24-204ENST00000569674 2357 ntBASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX49Q9Y6V7 AC079630.1-202ENST00000618127 1840 ntBASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
DDX49Q9Y6V7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.8■■□□□ 1.72
DDX49Q9Y6V7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms