Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPCS1Q9Y6A9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPCS1Q9Y6A9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPCS1Q9Y6A9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 AC079630.1-202ENST00000618127 1840 ntBASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPCS1Q9Y6A9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 AFG3L1P-217ENST00000557444 2447 ntBASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.89□□□□□ -0.03
SPCS1Q9Y6A9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SPCS1Q9Y6A9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS1Q9Y6A9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.88□□□□□ -0.03
SPCS1Q9Y6A9 BX323043.1-201ENST00000641006 1765 ntBASIC14.88□□□□□ -0.03
SPCS1Q9Y6A9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS1Q9Y6A9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS1Q9Y6A9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms